simulation 3 bioinformatics 3 visualization 3 python 3 machine-learning 2 genomics 2 image-processing 2 c-plus-plus 2 hpc 2 neuroscience 1 neuron 1 high-performance-computing 1 computer-vision 1 statistics 1 statistical-inference 1 quality-control 1 mri 1 fmri-data-analysis 1 fmri-analysis 1 classification 1 clustering 1 data-mining 1 data-science 1 data-visualization 1 decision-trees 1 numpy 1 orange 1 orange3 1 pandas 1 molecular dynamics 1

C++ 4 C 4 Python 3 Java 3 Groovy 1 Shell 1 Perl 1

nrnhines 645 bentsherman 619 akohlmey 527 alkino 472 biagas 462 jcgoran 444 alexsavulescu 426 jcfr 423 ramcdougal 421 dependabot[bot] 404 justinprivitera 381 pditommaso 374 pramodk 371 paulwessel 351 lassoan 306 mcovarr 286 afni-rickr 264 1uc 244 markcmiller86 242 olupton 227 seisman 224 cyrush 222 joa-quim 220 jorgee 209 janezd 201 rbdavis 181 brugger1 175 gbggrant 171 esteban82 170 slicer-app[bot] 160

dependabot[bot] 7 unknown 4 mathieu malaterre 3 julien schueller 3 sebastien barre 3 andy cedilnik 3 hank childs 3 tom fogal 3 tim thirion 3 burlen loring 3 julien nabet 3 jon haitz legarreta gorroño 3 luis ibanez 3 jim miller 3 kent williams 3 shelly belsky 3 hua yang 3 cory quammen 3 bernhard m. wiedemann 3 hans johnson 3 zack galbreath 3 stephen aylward 3 tim gates 3 dave partyka 3 julien finet 3 matt mccormick 3 matthew woehlke 3 max smolens 3 karthik krishnan 3 pablo hernandez-cerdan 3

axel kohlmeyer 17,652 paul wessel 15,939 rwcox 13,288 utkarsh ayachit 11,814 sjplimp 9,849 ken martin 9,754 jean-christophe fillion-robin 7,236 berk geveci 6,819 andy cedilnik 6,690 ben boeckel 6,469 brad king 6,426 paolo di tommaso 6,299 sebastien barre 5,806 kitware robot 5,419 eric brugger 5,272 will schroeder 5,242 bernd wiswedel 4,416 joaquim luis 4,298 steve pieper 3,945 david gobbi 3,901 bill lorensen 3,620 charles law 3,602 thorsten meinl 3,591 rick reynolds 3,345 hess 3,284 andras lasso 3,096 mathieu malaterre 3,058 francois bertel 2,958 amy squillacote 2,823 mrneont 2,733

actions:actions/checkout 11 actions:actions/upload-artifact 7 actions:actions/setup-python 6 pypi:numpy 6 pypi:sphinx 5 docker:ubuntu 5 pypi:packaging 4 pypi:sphinx_rtd_theme 4 pypi:setuptools 4 pypi:wheel 4 actions:actions/download-artifact 4 pypi:requests 3 pypi:pytest 3 pypi:pygments 3 pypi:pandas 3 pypi:scipy 3 actions:actions/setup-java 3 pypi:pyyaml 3 pypi:myst-parser 3 pypi:networkx 3 pypi:httpx 2 pypi:urllib3 2 pypi:sphinx-design 2 pypi:sphinx-notfound-page 2 pypi:idna 2 pypi:cython 2 pypi:six 2 pypi:charset-normalizer 2 actions:pypa/gh-action-pypi-publish 2 pypi:certifi 2

gromacs 1 GenericMappingTools 1 visit-dav 1 paraview 1 samtools 1 broadinstitute 1 afni 1 imagej 1 neuronsimulator 1 trinityrnaseq 1 biolab 1 Slicer 1 lammps 1 rachis-org 1 ESCOMP 1 cytoscape 1 vtk 1 BenLangmead 1 knime 1 nextflow-io 1

GitHub 17 gitlab.kitware.com 2 gitlab.com 1