python 3 simulation 3 visualization 3 bioinformatics 3 genomics 2 hpc 2 c-plus-plus 2 image-processing 2 machine-learning 2 orange3 1 orange 1 numpy 1 decision-trees 1 data-visualization 1 data-science 1 data-mining 1 clustering 1 classification 1 statistics 1 pandas 1 plotting 1 random-forest 1 regression 1 scikit-learn 1 scipy 1 visual-programming 1 dna 1 gatk 1 genome 1 data-analysis 1

C++ 4 C 4 Python 3 Java 3 Groovy 1 Shell 1 Perl 1

bentsherman 497 akohlmey 478 biagas 428 jcfr 423 jcgoran 376 dependabot[bot] 358 paulwessel 351 alkino 348 justinprivitera 342 pditommaso 315 mcovarr 278 nrnhines 260 lassoan 258 afni-rickr 246 1uc 233 markcmiller86 229 cyrush 205 joa-quim 200 seisman 195 janezd 190 rbdavis 181 jorgee 174 gbggrant 171 brugger1 167 slicer-app[bot] 157 ramcdougal 149 fischer-ncar 147 adamrtalbot 134 slicerbot 124 jamesobutler 120

dependabot[bot] 7 unknown 4 casey goodlett 3 matt mccormick 3 johan andruejol 3 max smolens 3 stephen aylward 3 matthew bowman 3 matthew woehlke 3 luis ibanez 3 dave partyka 3 sebastien barre 3 brad davis 3 bill lorensen 3 jim miller 3 julien finet 3 christoph junghans 3 jean-christophe fillion-robin 3 andrew bauer 3 kent williams 3 shelly belsky 3 kenneth moreland 3 hua yang 3 david stoup 3 cory quammen 3 tim thirion 3 lucas gandel 3 karthik krishnan 3 tim gates 3 julien schueller 3

axel kohlmeyer 17,607 paul wessel 15,939 utkarsh ayachit 11,814 sjplimp 9,849 ken martin 9,754 robert cox 8,012 jean-christophe fillion-robin 7,204 berk geveci 6,815 andy cedilnik 6,690 ben boeckel 6,448 brad king 6,426 paolo di tommaso 6,199 sebastien barre 5,806 kitware robot 5,343 rick reynolds 5,286 eric brugger 5,268 will schroeder 5,242 bernd wiswedel 4,416 joaquim luis 4,285 steve pieper 3,934 david gobbi 3,901 bill lorensen 3,620 charles law 3,602 thorsten meinl 3,591 hess 3,284 mathieu malaterre 3,058 andras lasso 2,969 francois bertel 2,958 amy squillacote 2,823 janezd 2,682

actions:actions/checkout 11 actions:actions/upload-artifact 7 pypi:sphinx 6 actions:actions/setup-python 6 docker:ubuntu 4 pypi:sphinx_rtd_theme 4 pypi:numpy 4 pypi:packaging 3 pypi:myst-parser 3 pypi:pytest 3 pypi:wheel 3 actions:actions/download-artifact 3 pypi:setuptools 3 pypi:networkx 3 actions:actions/setup-java 3 maven:commons-io:commons-io 2 pypi:mpi4py 2 actions:styfle/cancel-workflow-action 2 pypi:sphinx-notfound-page 2 pypi:lxml 2 pypi:Sphinx 2 pypi:sphinx-design 2 pypi:pyyaml 2 actions:shogo82148/actions-upload-release-asset 2 pypi:sphinx-copybutton 2 pypi:pandas 2 pypi:cython 2 pypi:pygments 2 pypi:matplotlib 2 maven:org.broadinstitute:gatk-native-bindings 1

visit-dav 1 imagej 1 rachis-org 1 trinityrnaseq 1 knime 1 ESCOMP 1 afni 1 biolab 1 cytoscape 1 broadinstitute 1 Slicer 1 neuronsimulator 1 paraview 1 vtk 1 gromacs 1 lammps 1 GenericMappingTools 1 BenLangmead 1 samtools 1 nextflow-io 1

GitHub 17 gitlab.kitware.com 2 gitlab.com 1