visualization 3 python 3 simulation 3 bioinformatics 3 hpc 2 machine-learning 2 image-processing 2 genomics 2 c-plus-plus 2 medical-imaging 1 national-institutes-of-health 1 neuroimaging 1 nih 1 neuron 1 qt 1 registration 1 segmentation 1 tcia-dac 1 tractography 1 vtk 1 molecular dynamics 1 anatomical-mri 1 dwi 1 fmri 1 fmri-analysis 1 fmri-data-analysis 1 mri 1 quality-control 1 statistical-inference 1 statistics 1

C 4 C++ 4 Python 3 Java 3 Groovy 1 Perl 1 Shell 1

bentsherman 544 akohlmey 504 biagas 447 jcfr 423 jcgoran 375 justinprivitera 365 dependabot[bot] 359 paulwessel 351 pditommaso 347 alkino 347 mcovarr 284 lassoan 280 nrnhines 271 afni-rickr 257 markcmiller86 237 1uc 233 seisman 220 joa-quim 216 cyrush 214 janezd 192 jorgee 192 rbdavis 181 gbggrant 171 brugger1 169 slicer-app[bot] 159 ramcdougal 156 fischer-ncar 152 esteban82 140 adamrtalbot 138 ewels 127

dependabot[bot] 7 unknown 4 bill lorensen 3 max smolens 3 jean-christophe fillion-robin 3 brad davis 3 alexy pellegrini 3 hank childs 3 andrew bauer 3 luis ibanez 3 kenneth moreland 3 kent williams 3 zack galbreath 3 shelly belsky 3 cory quammen 3 julien finet 3 pablo hernandez-cerdan 3 dave partyka 3 tim thirion 3 christoph junghans 3 shreeraj jadhav 3 jon haitz legarreta gorroño 3 tim gates 3 david allemang 3 johan andruejol 3 stephen aylward 3 sankhesh jhaveri 3 mathieu malaterre 3 jim miller 3 burlen loring 3

axel kohlmeyer 17,652 paul wessel 15,939 utkarsh ayachit 11,814 sjplimp 9,849 ken martin 9,754 robert cox 8,012 jean-christophe fillion-robin 7,236 berk geveci 6,815 andy cedilnik 6,690 ben boeckel 6,466 brad king 6,426 paolo di tommaso 6,222 sebastien barre 5,806 kitware robot 5,389 rick reynolds 5,286 eric brugger 5,270 will schroeder 5,242 bernd wiswedel 4,416 joaquim luis 4,285 steve pieper 3,945 david gobbi 3,901 bill lorensen 3,620 charles law 3,602 thorsten meinl 3,591 hess 3,284 mathieu malaterre 3,058 andras lasso 3,038 francois bertel 2,958 amy squillacote 2,823 janezd 2,686

actions:actions/checkout 11 actions:actions/upload-artifact 7 actions:actions/setup-python 6 pypi:numpy 5 pypi:sphinx 5 docker:ubuntu 4 pypi:wheel 4 pypi:sphinx_rtd_theme 4 pypi:setuptools 4 pypi:pyyaml 4 actions:actions/download-artifact 4 pypi:packaging 3 pypi:pytest 3 pypi:sphinx-design 3 pypi:networkx 3 pypi:pandas 3 pypi:myst-parser 3 actions:actions/setup-java 3 pypi:sphinx-notfound-page 3 pypi:Sphinx 3 pypi:docutils 3 pypi:pygments 3 pypi:requests 2 pypi:httpx 2 pypi:sphinxcontrib-jquery 2 actions:pypa/gh-action-pypi-publish 2 actions:shogo82148/actions-upload-release-asset 2 pypi:pip 2 pypi:lxml 2 maven:commons-io:commons-io 2

cytoscape 1 neuronsimulator 1 BenLangmead 1 lammps 1 imagej 1 rachis-org 1 ESCOMP 1 samtools 1 knime 1 vtk 1 Slicer 1 gromacs 1 afni 1 GenericMappingTools 1 biolab 1 paraview 1 trinityrnaseq 1 visit-dav 1 broadinstitute 1 nextflow-io 1

GitHub 17 gitlab.kitware.com 2 gitlab.com 1