python 3 simulation 3 bioinformatics 3 visualization 3 c-plus-plus 2 machine-learning 2 image-processing 2 genomics 2 hpc 2 molecular dynamics 1 visual-programming 1 scipy 1 scikit-learn 1 regression 1 random-forest 1 plotting 1 pandas 1 orange3 1 dna 1 gatk 1 genome 1 ngs 1 science 1 sequencing 1 spark 1 anatomical-mri 1 dwi 1 database 1 integration 1 open-source 1

C++ 4 C 4 Python 3 Java 3 Groovy 1 Shell 1 Perl 1

bentsherman 463 jcfr 422 biagas 398 akohlmey 393 jcgoran 377 paulwessel 351 alkino 347 dependabot[bot] 339 justinprivitera 318 pditommaso 279 mcovarr 248 lassoan 247 afni-rickr 239 nrnhines 234 1uc 233 markcmiller86 213 joa-quim 200 cyrush 194 seisman 193 rbdavis 181 gbggrant 168 janezd 168 brugger1 162 jorgee 150 slicer-app[bot] 148 ramcdougal 137 adamrtalbot 126 slicerbot 123 fischer-ncar 121 jamesobutler 113

dependabot[bot] 6 unknown 4 andy cedilnik 3 zack galbreath 3 sebastien barre 3 alexy pellegrini 3 david stoup 3 hua yang 3 kenneth moreland 3 shelly belsky 3 matt mccormick 3 david allemang 3 yumin yuan 3 julien nabet 3 bill lorensen 3 sankhesh jhaveri 3 karthik krishnan 3 brad davis 3 mathieu malaterre 3 jean-christophe fillion-robin 3 stephen aylward 3 matthew woehlke 3 cory quammen 3 casey goodlett 3 max smolens 3 matthew bowman 3 julien finet 3 hank childs 3 tom fogal 3 pablo hernandez-cerdan 3

paul wessel 15,939 axel kohlmeyer 15,251 utkarsh ayachit 11,814 sjplimp 9,849 ken martin 9,754 robert cox 8,008 jean-christophe fillion-robin 7,174 andy cedilnik 6,690 berk geveci 6,651 brad king 6,426 ben boeckel 6,273 paolo di tommaso 5,976 sebastien barre 5,806 eric brugger 5,253 will schroeder 5,225 rick reynolds 5,181 kitware robot 4,783 bernd wiswedel 4,390 joaquim luis 4,175 steve pieper 3,917 david gobbi 3,870 bill lorensen 3,620 charles law 3,602 thorsten meinl 3,591 hess 3,284 mathieu malaterre 3,058 francois bertel 2,958 andras lasso 2,871 amy squillacote 2,823 remko scharroo 2,679

actions:actions/checkout 8 actions:actions/upload-artifact 6 pypi:sphinx 5 docker:ubuntu 4 actions:actions/setup-python 4 actions:actions/setup-java 3 pypi:sphinx_rtd_theme 3 pypi:numpy 3 pypi:setuptools 3 pypi:wheel 3 pypi:Pygments 2 pypi:pip 2 pypi:packaging 2 pypi:Sphinx 2 actions:actions/download-artifact 2 pypi:myst-parser 2 pypi:build 2 pypi:mpi4py 2 pypi:pytest 2 maven:commons-io:commons-io 2 pypi:sphinx-notfound-page 2 actions:shogo82148/actions-upload-release-asset 2 actions:styfle/cancel-workflow-action 2 conda:filelock 1 conda:ipython 1 maven:org.broadinstitute:gatk-bwamem-jni 1 conda:matplotlib 1 conda:nibabel 1 maven:com.intel.gkl:gkl 1 maven:com.esotericsoftware:kryo 1

knime 1 trinityrnaseq 1 GenericMappingTools 1 qiime2 1 paraview 1 vtk 1 imagej 1 cytoscape 1 ESCOMP 1 biolab 1 gromacs 1 broadinstitute 1 afni 1 visit-dav 1 Slicer 1 neuronsimulator 1 lammps 1 BenLangmead 1 samtools 1 nextflow-io 1

GitHub 17 gitlab.kitware.com 2 gitlab.com 1