simulation 3 bioinformatics 3 visualization 3 python 3 genomics 2 image-processing 2 hpc 2 c-plus-plus 2 machine-learning 2 neuron 1 high-performance-computing 1 read-aligners 1 hacktoberfest 1 spark 1 sequencing 1 science 1 ngs 1 neuroscience 1 kokkos 1 lammps 1 molecular-dynamics 1 anatomical-mri 1 dwi 1 fmri 1 fmri-analysis 1 fmri-data-analysis 1 mri 1 quality-control 1 statistical-inference 1 statistics 1

C++ 4 C 4 Python 3 Java 3 Groovy 1 Shell 1 Perl 1

bentsherman 561 akohlmey 517 biagas 454 jcfr 423 dependabot[bot] 388 jcgoran 377 justinprivitera 376 pditommaso 355 paulwessel 351 alkino 348 lassoan 292 mcovarr 286 nrnhines 278 afni-rickr 259 markcmiller86 240 1uc 233 seisman 222 joa-quim 219 cyrush 217 janezd 195 jorgee 194 rbdavis 181 brugger1 171 gbggrant 171 slicer-app[bot] 160 ramcdougal 157 fischer-ncar 154 esteban82 151 adamrtalbot 138 mrneont 127

dependabot[bot] 7 unknown 4 mathieu malaterre 3 sankhesh jhaveri 3 jim miller 3 jean-christophe fillion-robin 3 brad davis 3 andy cedilnik 3 bill lorensen 3 kenneth moreland 3 matthew woehlke 3 lucas gandel 3 hank childs 3 casey goodlett 3 johan andruejol 3 max smolens 3 pablo hernandez-cerdan 3 zack galbreath 3 karthik krishnan 3 luis ibanez 3 andrew bauer 3 matt mccormick 3 kent williams 3 dave partyka 3 cory quammen 3 tim gates 3 matthew bowman 3 hans johnson 3 julien finet 3 shreeraj jadhav 3

axel kohlmeyer 17,652 paul wessel 15,939 utkarsh ayachit 11,814 sjplimp 9,849 ken martin 9,754 robert cox 8,012 jean-christophe fillion-robin 7,236 berk geveci 6,817 andy cedilnik 6,690 ben boeckel 6,466 brad king 6,426 paolo di tommaso 6,222 sebastien barre 5,806 kitware robot 5,401 rick reynolds 5,286 eric brugger 5,270 will schroeder 5,242 bernd wiswedel 4,416 joaquim luis 4,285 steve pieper 3,945 david gobbi 3,901 bill lorensen 3,620 charles law 3,602 thorsten meinl 3,591 hess 3,284 andras lasso 3,068 mathieu malaterre 3,058 francois bertel 2,958 amy squillacote 2,823 janezd 2,689

actions:actions/checkout 11 actions:actions/upload-artifact 7 actions:actions/setup-python 6 docker:ubuntu 5 pypi:sphinx 5 pypi:numpy 5 actions:actions/download-artifact 4 pypi:pyyaml 4 pypi:sphinx_rtd_theme 4 pypi:wheel 4 pypi:setuptools 4 pypi:networkx 3 pypi:pandas 3 actions:actions/setup-java 3 pypi:packaging 3 pypi:sphinx-design 3 pypi:Sphinx 3 pypi:docutils 3 pypi:sphinx-notfound-page 3 pypi:pytest 3 pypi:myst-parser 3 pypi:pygments 3 maven:commons-io:commons-io 2 actions:docker/login-action 2 actions:docker/build-push-action 2 pypi:sphinx-tabs 2 pypi:mpi4py 2 pypi:platformdirs 2 pypi:psutil 2 pypi:python-dateutil 2

trinityrnaseq 1 GenericMappingTools 1 samtools 1 imagej 1 knime 1 gromacs 1 vtk 1 paraview 1 visit-dav 1 broadinstitute 1 rachis-org 1 cytoscape 1 BenLangmead 1 neuronsimulator 1 lammps 1 afni 1 ESCOMP 1 biolab 1 Slicer 1 nextflow-io 1

GitHub 17 gitlab.kitware.com 2 gitlab.com 1