https://github.com/h5preserve/h5preserve
Thin wrapper around h5py and HDF5, inspired by camel
hdf5 python
Last synced: 28 Sep 2026
https://github.com/rreinecke/global-gradient-based-groundwater-model
The global gradient-based groundwater model G³M
Last synced: 28 Sep 2026
https://github.com/bmcage/odes/
The ODES scikit for ordinary differential and algebraic equations, an extension to scipy
Last synced: 28 Sep 2026
https://github.com/zedtaha/ivprobit-1.0
ivprobit fit an Instrumental variables probit model using the generalized least squares estimator
Last synced: 28 Sep 2026
https://github.com/ResidentMario/missingno
Missing data visualization module for Python.
data-analysis data-visualization missing-data pandas python
Last synced: 28 Sep 2026
https://github.com/pacificclimate/ClimDown
PCIC's Daily Climate Downscaling Library
Last synced: 28 Sep 2026
https://github.com/piermorel/gramm
Gramm is a complete data visualization toolbox for Matlab. It provides an easy to use and high-level interface to produce publication-quality plots of complex data with varied statistical visualizations. Gramm is inspired by R's ggplot2 library.
data-visualization matlab plot statistics stats visualization
Last synced: 28 Sep 2026
https://github.com/KOALA-LMU/coalitions
Coalition probabilities in multi-party democracies
coalition-probabilities election-analysis elections r rstats
Last synced: 28 Sep 2026
https://github.com/PetoLau/TSrepr
TSrepr: R package for time series representations
data-analysis data-mining data-mining-algorithms data-science r r-package representation time-series time-series-analysis time-series-classification time-series-clustering time-series-data-mining time-series-representations
Last synced: 28 Sep 2026
https://github.com/WinVector/vtreat/
vtreat is a data frame processor/conditioner that prepares real-world data for predictive modeling in a statistically sound manner. Distributed under choice of GPL-2 or GPL-3 license.
categorical-variables machine-learning-algorithms nested-models prepare-data r
Last synced: 28 Sep 2026
https://github.com/JuliaDynamics/DynamicalSystems.jl
Award winning software library for nonlinear dynamics and nonlinear timeseries analysis
attractor chaos complexity delay-coordinates dynamical-systems entropy fractal-dimension hacktoberfest lyapunov mathematics nonlinear nonlinear-dynamics physics
Last synced: 28 Sep 2026
https://github.com/ropensci/hydroscoper
R interface to the Greek National Data Bank for Hydrometeorological Information
climate greece hydrology hydrometeorology hydroscope meteorological-data meteorological-stations peer-reviewed r r-package rstats tidy-data time-series water-resources
Last synced: 28 Sep 2026
https://github.com/ropensci/ijtiff
An R Package for general purpose TIFF file I/O which plays nice with ImageJ
image-manipulation imagej peer-reviewed r r-package rstats tiff-files tiff-images
Last synced: 28 Sep 2026
https://github.com/pynucastro/pynucastro
a python library for nuclear astrophysics
Last synced: 29 Sep 2026
https://github.com/NiaOrg/NiaPy
Python microframework for building nature-inspired algorithms. Official docs: https://niapy.org
hacktoberfest microframework nature-inspired-algorithms optimization-algorithms python swarm-intelligence
Last synced: 28 Sep 2026
https://github.com/poissonconsulting/checkr
An R package of assertive functions to check the properties of common R objects.
assertion checkr rstats
Last synced: 28 Sep 2026
https://github.com/ropensci/tokenizers
Fast, Consistent Tokenization of Natural Language Text
nlp peer-reviewed r r-package rstats text-mining tokenizer
Last synced: 28 Sep 2026
https://github.com/jronayne/PyTransport
A Python Package for the calculation of inflationary correlation functions.
Last synced: 28 Sep 2026
https://github.com/ropensci/USAboundaries
Historical and Contemporary Boundaries of the United States of America
digital-history history r r-package rstats spatial-data
Last synced: 28 Sep 2026
https://github.com/ellessenne/comorbidity
An R package for computing comorbidity scores.
comorbidity r rstats
Last synced: 28 Sep 2026
https://github.com/nunofachada/micompm
Multivariate independent comparison of observations
matlab matlab-toolbox multivariate multivariate-data multivariate-distributions multivariate-observations non-parametric octave octave-functions octave-scripts parametric-tests statistical-analysis statistical-data statistical-methods statistical-tests
Last synced: 28 Sep 2026
https://github.com/FastNFT/FNFT
Fast numerical computation of (inverse) nonlinear Fourier transforms
c matlab-interface nonlinear-fourier-transform python-interface
Last synced: 28 Sep 2026
https://github.com/casics/spiral
A Python 3 module that provides functions for splitting identifiers found in source code files.
camelcase identifier machine-learning mining-software-repositories python source-code split-string splitter splitting-identifiers tokenisation
Last synced: 28 Sep 2026
https://github.com/bjodah/chempy
⚗ A package useful for chemistry written in Python
chemical-formulas chemical-kinetics chemical-reaction-model chemistry physical-chemistry python speciation
Last synced: 28 Sep 2026
https://github.com/JuliaNLSolvers/Optim.jl
Optimization functions for Julia
julia optim optimisation optimization unconstrained-optimisation unconstrained-optimization
Last synced: 29 Sep 2026
https://github.com/microPIECE-team/microPIECE
microPIECE (microRNA pipeline enhanced by CLIP experiments)
Last synced: 28 Sep 2026
https://github.com/caseyyoungflesh/MCMCvis
R package to visualize, manipulate, and summarize MCMC output
Last synced: 28 Sep 2026
https://github.com/mathLab/EZyRB
Easy Reduced Basis method
autoencoder data-driven hacktoberfest model-order-reduction model-reduction non-intrusive-model-order-reduction pod-gpr pod-interpolation pod-nn proper-orthogonal-decomposition reduced-basis
Last synced: 28 Sep 2026
https://github.com/caley/OpenEPSim
General simulation code for ASEP like models on 1D lattices
Last synced: 28 Sep 2026
https://github.com/terrytangyuan/autoplotly
Automatic Generation of Interactive Visualizations for Statistical Results
data-visualization ggplot2 interactive-visualizations machine-learning plotly plotlyjs rstats statistics
Last synced: 28 Sep 2026
https://github.com/brian-rose/climlab/
Python package for process-oriented climate modeling
Last synced: 28 Sep 2026
https://github.com/ropensci/qualtRics
Download ⬇️ Qualtrics survey data directly into R!
api qualtrics qualtrics-api r r-package rstats survey survey-data
Last synced: 28 Sep 2026
https://github.com/rasbt/mlxtend
A library of extension and helper modules for Python's data analysis and machine learning libraries.
association-rules data-mining data-science machine-learning python supervised-learning unsupervised-learning
Last synced: 29 Sep 2026
https://github.com/JuliaEarth/GeoStats.jl
An extensible framework for geospatial data science and geostatistical modeling fully written in Julia
datascience geo geomodeling geospatial geostatistics gis spatial-statistics statistical-learning statistics
Last synced: 29 Sep 2026
https://github.com/atmoschem/eixport
Export Emissions to Atmospheric Models
atmospheric-models atmospheric-science emissions exporting-emissions wrf
Last synced: 28 Sep 2026
https://github.com/ropensci/EndoMineR
Endoscopic and Pathological data extraction for various endo-pathological data extraction
endoscopy gastroenterology peer-reviewed r r-package rstats semi-structured-data text-mining
Last synced: 28 Sep 2026
https://github.com/virgesmith/humanleague
Microsynthesis using quasirandom sampling and/or IPF
c-plus-plus-11 microsynthesis nodejs python3 quasirandom r sampling-methods
Last synced: 28 Sep 2026
https://github.com/FluxML/Flux.jl
Relax! Flux is the ML library that doesn't make you tensor
data-science deep-learning flux machine-learning neural-networks the-human-brain
Last synced: 28 Sep 2026
https://github.com/ropensci/suppdata
Grabbing SUPPlementary DATA in R
peer-reviewed r r-package rstats
Last synced: 28 Sep 2026
https://github.com/achennu/microbenthos
Modeling framework for microbenthic habitats useful for studies in biogeochemistry and marine microbial ecology.
Last synced: 28 Sep 2026
https://github.com/iferres/phylen
Compute a phylogeny using EggNOG database
bioinformatics eggnog genome hidden-markov-models phylogeny r
Last synced: 28 Sep 2026
https://github.com/benjamin-allevius/scanstatistics
An R package for space-time anomaly detection using scan statistics.
anomaly-detection cluster r rcpp rcpparmadillo scan-statistics spatial spatio-temporal statistics
Last synced: 28 Sep 2026
https://github.com/casics/nostril
Nostril: Nonsense String Evaluator
detector gibberish identifier-string identifiers inference mining-software-repositories nonsense nonsense-string-evaluator source-code text-processing
Last synced: 28 Sep 2026
https://github.com/bblankrot/ParticleScattering.jl
A Julia package for solving two-dimensional electromagnetic scattering from numerous particles
computational-electromagnetics julia multiple optimization particle scattering
Last synced: 28 Sep 2026
https://github.com/OSC/ondemand
Supercomputing. Seamlessly. Open, Interactive HPC Via the Web
gateway hacktoberfest hpc hpc-applications
Last synced: 28 Sep 2026
https://github.com/DTChuck/HSImage
A Python and C++ library to allow interaction with ENVI-BIL hyperspectral images
Last synced: 28 Sep 2026
https://github.com/sepandhaghighi/pycm
Multi-class confusion matrix library in Python
accuracy ai artificial-intelligence classification confusion-matrix data data-analysis data-mining data-science deep-learning deeplearning evaluation machine-learning mathematics matrix ml multiclass-classification neural-network statistical-analysis statistics
Last synced: 28 Sep 2026
https://github.com/barbagroup/PetIBM
PetIBM - toolbox and applications of the immersed-boundary method on distributed-memory architectures
computational-fluid-dynamics gpu-computing immersed-boundary-method nvidia-amgx petsc
Last synced: 28 Sep 2026
https://github.com/dit/dit
**dit** is a Python package for information theory.
information-theory python
Last synced: 28 Sep 2026
https://github.com/siravan/fib_tf
electrophysiology ode-solver pde tensorflow
Last synced: 28 Sep 2026
https://github.com/mikldk/disclapmix
Discrete Laplace Mixture Inference using the EM Algorithm
Last synced: 28 Sep 2026
https://github.com/jrbourbeau/pyunfold
Iterative unfolding for Python
data-analysis deconvolution inverse-problems python regularization statistics unfolding
Last synced: 28 Sep 2026
https://github.com/octapps/octapps
Library of Octave functions for continuous gravitational-wave data analysis
Last synced: 28 Sep 2026
https://github.com/drostlab/philentropy
Information Theory and Distance Quantification with R
distance-measures distance-quantification information-theory jensen-shannon-divergence parametric-distributions r similarity-measures statistics
Last synced: 28 Sep 2026
https://github.com/SMTG-Bham/galore
Gaussian and Lorentzian smearing of simulated spectra
Last synced: 28 Sep 2026
https://github.com/edoddridge/aronnax
An idealised isopycnal model that can be run either with n+1/2 layers, or with n layers and variable bathymetry.
Last synced: 28 Sep 2026
https://github.com/mirzaevinom/egtplot
egtplot: A python package for 3-Strategy Evolutionary Games
dynamical-systems evolutionary-game-theory game-theory visualization
Last synced: 28 Sep 2026
https://github.com/UniNE-CHYN/mmappickle
Python 3 library to store memory mappable objects into pickle-compatible files
dictionary memory mmap python python-3 python-library python3
Last synced: 28 Sep 2026
https://github.com/j-faria/kima
Exoplanet detection in RVs with DNest4 and GPs
bayesian exoplanets gaussian-processes hacktoberfest radial-velocity
Last synced: 28 Sep 2026
https://github.com/strengejacke/sjmisc
Data transformation and utility functions for R
data-transformation data-wrangling labelled-data r recoding
Last synced: 28 Sep 2026
https://github.com/vsoch/helpme
command line daemon for helping you out
command-line containers docker github helper research-tool singularity uservoice
Last synced: 28 Sep 2026
https://github.com/ellessenne/rsimsum/
Analysis of simulation studies including Monte Carlo error
biostatistics monte-carlo-error r rstats simulation simulation-study simulations statistics
Last synced: 28 Sep 2026
https://github.com/spinicist/QUIT
A set of tools for processing Quantitative MR Images
Last synced: 28 Sep 2026
https://github.com/HPAC/matchpy
A library for pattern matching on symbolic expressions in Python.
pattern-matching python symbolic-expressions term-rewriting
Last synced: 28 Sep 2026
https://github.com/jfjlaros/bin-parser
General binary file parser.
binary json parser yaml
Last synced: 28 Sep 2026
https://github.com/ryneches/SuchTree
A Python library for fast, thread-safe computations on phylogenetic trees
Last synced: 28 Sep 2026
https://github.com/ropensci/phylogram
Dendrograms for Evolutionary Analysis
peer-reviewed r r-package rstats
Last synced: 28 Sep 2026
https://github.com/resibots/limbo
A lightweight framework for Gaussian processes and Bayesian optimization of black-box functions (C++11)
bayesian-optimization gaussian-processes optimization-framework optimization-library
Last synced: 28 Sep 2026
https://github.com/giuseppec/iml
iml: interpretable machine learning R package
Last synced: 28 Sep 2026
https://github.com/gregreen/dustmaps
A uniform interface for a number of 2D and 3D maps of interstellar dust reddening/extinction.
Last synced: 28 Sep 2026
https://github.com/dhhagan/py-opc
Python wrapper for the Alphasense OPC-N2 built around py-spidev
Last synced: 28 Sep 2026
https://github.com/dgasmith/opt_einsum
⚡️Optimizing einsum functions in NumPy, Tensorflow, Dask, and more with contraction order optimization.
contraction einsum gpu-acceleration performance python tensor tensor-contraction
Last synced: 28 Sep 2026
https://github.com/strengejacke/ggeffects
Estimated Marginal Means and Marginal Effects from Regression Models for ggplot2
estimated-marginal-means hacktoberfest marginal-effects prediction
Last synced: 28 Sep 2026
https://github.com/ashleefv/BeeNestABM
Agent-based model of spatiotemporal distribution of bumblebees in nests
Last synced: 28 Sep 2026
https://github.com/lebebr01/pdfsearch
Search pdf files for keywords.
keyword pdf r
Last synced: 28 Sep 2026
https://github.com/salabim/salabim
salabim - discrete event simulation
animation discrete-event-simulation logistics python
Last synced: 28 Sep 2026
https://github.com/IFB-ElixirFr/edam-browser
Former location of edam-browser
Last synced: 28 Sep 2026
https://github.com/ECSIM/opem
OPEM (Open Source PEM Fuel Cell Simulation Tool)
chemistry dynamic-analysis electrochemistry fuel-cell opem pem physics physics-simulation python script simulation simulator static-analysis static-analyzer
Last synced: 28 Sep 2026
https://github.com/cylc/cylc-flow
Cylc: a general purpose workflow engine with a gift for cycling
cycling-workflows cylc job-scheduler metascheduler python scheduler scheduling workflow workflow-automation workflow-engine workflow-management
Last synced: 28 Sep 2026
https://github.com/astorfi/speechpy
:speech_balloon: SpeechPy - A Library for Speech Processing and Recognition: http://speechpy.readthedocs.io/en/latest/
feature-extraction python speech-recognition speechpy
Last synced: 28 Sep 2026
https://github.com/ropensci/nomisr
Access UK official statistics from the Nomis database through R.
api-client census-data demography geographic-data national-statistics official-statistics officialstatistics peer-reviewed r r-package rstats uk
Last synced: 28 Sep 2026
https://github.com/robwschlegel/heatwaveR
This GitHub repo contains all of the code for the heatwaveR package.
Last synced: 28 Sep 2026
https://github.com/momargoh/MCycle
A Python package for 1D sizing and analysis of thermodynamic power cycles
heat-exchanger heat-transfer power-cycle thermodynamics thermodynamics-models
Last synced: 28 Sep 2026
https://github.com/nismod/ukpopulation
Population and demographics projection module, developed for ITRC/MISTRAL
demographics population
Last synced: 28 Sep 2026
https://github.com/Frost-group/PolaronMobility.jl
Feynman's variational path-integral model for the Fröhlich polaron. Calculates temperature dependent polaron mobilities, and other polaron observables.
mobility path-integral physics polarons solid-state
Last synced: 28 Sep 2026
https://github.com/andrewthomasjones/logKDE
Kernel Density Estimates on (0,Inf)
Last synced: 28 Sep 2026
https://github.com/pdwaggoner/hhi
Calculate and Visualize Herfindahl-Hirschman Index Scores
Last synced: 28 Sep 2026
https://github.com/SMTG-Bham/sumo
Heavyweight plotting tools for ab initio calculations
computational-chemistry materials-science plotting python
Last synced: 28 Sep 2026
https://github.com/lucydot/effmass
Calculates various definitions of effective mass from the electronic bandstructure of a semiconductor.
Last synced: 28 Sep 2026
https://github.com/ropensci-archive/jstor
:warning: ARCHIVED :warning: Import journal data from DfR (JSTOR)
jstor peer-reviewed r r-package rstats text-analysis text-mining
Last synced: 28 Sep 2026
https://github.com/lumenlearning/rise
RISE Analysis in R
continuous-improvement learning-analytics open-educational-resources
Last synced: 28 Sep 2026
https://github.com/tdaverse/TDAstats
R pipeline for computing persistent homology in topological data analysis. See https://doi.org/10.21105/joss.00860 for more details.
cran data-science ggplot2 homology homology-calculations homology-computation joss persistent-homology pipeline r r-package r-packages ripser tda topological-data-analysis topology topology-visualization visualization
Last synced: 28 Sep 2026
https://github.com/betteridiot/bamnostic
a pure Python multi-version tolerant, runtime and OS-agnostic Binary Alignment Map (BAM) file parser and random access tool
Last synced: 28 Sep 2026
https://github.com/JohnCoene/sigmajs
Σ sigma.js for R
htmlwidgets network-visualization r rstats sigmajs
Last synced: 28 Sep 2026
