JOSS: https://github.com/mikldk/malan
Score: 6.194405391104673
Last synced: about 10 hours ago
JSON representation
Repository metadata:
MAle Lineage ANalysis
- Host: GitHub
- URL: https://github.com/mikldk/malan
- Owner: mikldk
- License: gpl-2.0
- Created: 2016-11-15T15:32:52.000Z (over 9 years ago)
- Default Branch: master
- Last Pushed: 2025-08-19T21:18:43.000Z (10 months ago)
- Last Synced: 2025-10-29T08:53:58.610Z (8 months ago)
- Language: C++
- Homepage:
- Size: 10.4 MB
- Stars: 0
- Watchers: 1
- Forks: 3
- Open Issues: 1
-
Metadata Files:
- Readme: README.md
- Changelog: NEWS
- License: LICENSE
- Codemeta: codemeta.json
CodeMeta metadata:
- @context: https://raw.githubusercontent.com/codemeta/codemeta/master/codemeta.jsonld
- @type: Code
- Author:
- @id: https://orcid.org/0000-0002-0234-0266
- @type: Person
- Email: mikl@math.aau.dk
- Name: Mikkel Meyer Andersen
- Affiliation: Department of Mathematical Sciences, Aalborg University, Denmark
- Identifier:
- Code repository: https://github.com/mikldk/malan
- Date published: 2018-05-06
- Date modified: 2018-05-06
- Date created: 2018-05-06
- Description: An R package to perform MAle Lineage ANalysis by simulating genealogies backwards and imposing short tandem repeats (STR) mutations forwards. Intended for forensic Y chromosomal STR (Y-STR) haplotype analyses. Numerous analyses are possible, e.g. number of matches and meiotic distance to matches.
- Keywords: forensic genetics, STR loci, Y-chromosome, population genetics
- License: GPL v2.0
- Title: malan: MAle Lineage ANalysis
- Version: 1.0.0
Owner metadata:
- Name: Mikkel Meyer Andersen
- Login: mikldk
- Email:
- Kind: user
- Description:
- Website:
- Location: Denmark
- Twitter:
- Company:
- Icon url: https://avatars.githubusercontent.com/u/7080679?u=b9db555fcc0f9cb0f38750ebec814de1c8010194&v=4
- Repositories: 64
- Last Synced at: 2024-03-31T01:01:13.352Z
- Profile URL: https://github.com/mikldk
GitHub Events
Total
- Create event: 1
- Push event: 1
- Release event: 1
- Total: 3
Last Year
- Create event: 1
- Push event: 1
- Release event: 1
- Total: 3
Committers metadata
Last synced: 8 months ago
Total Commits: 258
Total Committers: 2
Avg Commits per committer: 129.0
Development Distribution Score (DDS): 0.004
Commits in past year: 1
Committers in past year: 1
Avg Commits per committer in past year: 1.0
Development Distribution Score (DDS) in past year: 0.0
| Name | Commits | |
|---|---|---|
| Mikkel Meyer Andersen | m****l@m****k | 257 |
| olivroy | 5****y | 1 |
Issue and Pull Request metadata
Last synced: 10 months ago
Total issues: 11
Total pull requests: 8
Average time to close issues: 5 days
Average time to close pull requests: 4 days
Total issue authors: 4
Total pull request authors: 2
Average comments per issue: 3.82
Average comments per pull request: 0.25
Merged pull request: 8
Bot issues: 0
Bot pull requests: 0
Past year issues: 0
Past year pull requests: 0
Past year average time to close issues: N/A
Past year average time to close pull requests: N/A
Past year issue authors: 0
Past year pull request authors: 0
Past year average comments per issue: 0
Past year average comments per pull request: 0
Past year merged pull request: 0
Past year bot issues: 0
Past year bot pull requests: 0
Top Issue Authors
- afrubin (6)
- ajank (3)
- szhorvat (1)
- mikldk (1)
Top Pull Request Authors
- mikldk (7)
- olivroy (2)
Top Issue Labels
Top Pull Request Labels
Package metadata
- Total packages: 1
-
Total downloads:
- cran: 244 last-month
- Total dependent packages: 0
- Total dependent repositories: 0
- Total versions: 3
- Total maintainers: 1
cran.r-project.org: malan
MAle Lineage ANalysis
- Homepage: https://mikldk.github.io/malan/
- Documentation: http://cran.r-project.org/web/packages/malan/malan.pdf
- Licenses: GPL-2 | file LICENSE
- Latest release: 1.0.4 (published 10 months ago)
- Last Synced: 2025-10-30T03:57:25.825Z (8 months ago)
- Versions: 3
- Dependent Packages: 0
- Dependent Repositories: 0
- Downloads: 244 Last month
-
Rankings:
- Forks count: 14.856%
- Dependent packages count: 29.797%
- Stargazers count: 35.156%
- Dependent repos count: 35.455%
- Average: 39.284%
- Downloads: 81.154%
- Maintainers (1)
Dependencies
- R >= 2.10 depends
- dplyr >= 0.7.3 depends
- tidygraph >= 1.0.0.9999 depends
- Rcpp >= 0.12.7 imports
- RcppArmadillo >= 0.9.880.1.0 imports
- RcppProgress >= 0.2.1 imports
- igraph >= 1.0.1 imports
- magrittr >= 1.5 imports
- methods * imports
- tibble >= 1.1 imports
- Rmpfr * suggests
- dirmult * suggests
- ggraph * suggests
- knitr * suggests
- rmarkdown * suggests
- testthat * suggests