Ecosyste.ms: Summary

An open API service providing a high level summary for open source projects.

Collections: pyOpenSci

https://github.com/Ouranosinc/xclim

Library of derived climate variables, ie climate indicators, based on xarray.

anuclim climate-analysis climate-science dask icclim netcdf4 python xarray xclim

Last synced: 19 May 2024

https://github.com/movingpandas/movingpandas

Movement trajectory classes and functions built on top of GeoPandas

geopandas movement-data python spatial-data-analysis trajectory trajectory-analysis

Last synced: 19 May 2024

https://github.com/GenericMappingTools/pygmt

A Python interface for the Generic Mapping Tools.

earth-science geophysics geoscience hacktoberfest maps python seismology

Last synced: 19 May 2024

https://github.com/earthlab/earthpy

A package built to support working with spatial data using open source python

education python raster spatial-data vector

Last synced: 19 May 2024

https://github.com/python-graphblas/python-graphblas

Python library for GraphBLAS: high-performance sparse linear algebra for scalable graph analytics

complex-networks graph-algorithms graph-analysis graph-datastructures graph-theory graphblas linear-algebra numba pydata python python-wrapper sparse sparse-data sparse-matrix suitesparse

Last synced: 19 May 2024

https://github.com/pystiche/pystiche

Framework for Neural Style Transfer (NST) built upon PyTorch

framework neural-style-transfer python pytorch

Last synced: 19 May 2024

https://github.com/jacksonburns/astartes

Better Data Splits for Machine Learning

ai data-science machine-learning ml python sampling

Last synced: 19 May 2024

https://github.com/vocalpy/crowsetta

A tool to work with any format for annotating vocalizations

animal-communication animal-vocalizations annotation annotation-format bioacoustic-analysis bioacoustics birdsong csv dataset python python3

Last synced: 19 May 2024

https://github.com/taxprofiler/taxpasta

TAXnomic Profile Aggregation and STAndardisation

bioinformatics classification metagenomic-classification metagenomics profiling python standardisation taxonomic-classifications taxonomic-profiling

Last synced: 19 May 2024

https://github.com/McTavishLab/physcraper

Welcome to Physcraper’s repository! Automatic gene tree updating using the Open Tree of Life.

bioinformatics biology python

Last synced: 19 May 2024

https://github.com/JonnyTran/OpenOmics

A bioinformatics API to interface with public multi-omics bio databases for wicked fast data integration.

data-integration data-manipulation genomics multi-omics python

Last synced: 19 May 2024

https://github.com/Robaina/Pynteny

Query sequence database by HMMs arranged in predefined synteny structure

bioinformatics computational-biology genomics hmm hmmer metagenomics prokaryotic-genomes python synteny synteny-block

Last synced: 19 May 2024

https://github.com/teddygroves/bibat/

A batteries-included template for Bayesian data analysis projects

arviz bayesian-statistics cmdstanpy cookiecutter mcmc python stan template-project

Last synced: 19 May 2024

Keywords
python 13 bioinformatics 3 geoscience 2 metagenomics 2 data-science 2 genomics 2 biology 2 earth-science 1 validation 1 testing-tools 1 testing 1 schema 1 pandas-validator 1 pandas-validation 1 pandas-dataframe 1 pandas 1 hypothesis-testing 1 dataframes 1 dataframe-schema 1 geophysics 1 hacktoberfest 1 maps 1 seismology 1 education 1 raster 1 spatial-data 1 vector 1 classification 1 metagenomic-classification 1 profiling 1 standardisation 1 taxonomic-classifications 1 anuclim 1 climate-analysis 1 climate-science 1 dask 1 icclim 1 netcdf4 1 xarray 1 xclim 1 arviz 1 bayesian-statistics 1 cmdstanpy 1 cookiecutter 1 mcmc 1 stan 1 template-project 1 higher-order-networks 1 hypergraphs 1 network-science 1
Languages
Python 20 Jupyter Notebook 1 HTML 1
Committers
dependabot[bot] 4 pyup-bot 3 pre-commit-ci[bot] 3 leonardo uieda 2 arne 2 ariane sasso 2 brian larsen 2 arfon smith 2 allcontributors[bot] 2 np-yoe 1 thorben-flapo 1 tess linden 1 tom collingwood 1 vini salazar 1 andy boomer 1 andy mackinlay 1 brian phillips 1 bruce mauger 1 dan anderson 1 kunifuohbc 1 kt215 1 karlma821 1 matt richards 1 amit ripshtos 1 alex anthony 1 aleksei kozharin 1 aditya singh 1 adam weeden 1 alkment 1 zev 1 mark elliot 1 linden wells 1 kyle hansen 1 kiavash fathi 1 jon wiggins 1 jacob baldwin 1 rob 1 maximilian 1 matthew painter 1 matthew hawthorn 1 markey, nigel 1 matt eby 1 matthias huschle 1 daniel hjertholm 1 dave bunten 1 david bossanyi 1 dillon steyl 1 drumbits 1 eric ma 1 ethan thompson 1
Most Commits
zeitsperre 2,428 morgan williams 1,883 pascal bourgault 1,235 jonny tran 1,022 jonnytran 904 martha kandziora 879 mluerig 852 dongdong tian 807 emily jane mctavish 805 david nicholson 706 david huard 653 erik welch 643 semidán robaina estévez 597 anita graser 532 philip meier 491 moritz e. beber 481 teddy groves 455 sam pottinger 455 jackson burns 452 leah wasser 448 éric dupuis 441 niels bantilan 440 dependabot[bot] 311 luna sare 298 nicholas landry 290 martin skarzynski 284 leonardo uieda 257 wei ji 245 bumpversion[bot] 237 yvonne fröhlich 211 will schlitzer 191 pre-commit-ci[bot] 172 abel 170 juliettelavoie 164 ludwig.lierhammer 161 nickledave 155 katharina kloppenborg 149 travis logan 146 pyup-bot 145 jostmorgenstern 140 michael grund 139 ariane morassi sasso 113 meghan jones 110 nathan korinek 105 max joseph 87 jim kitchen 86 ariane sasso 84 kevin spiekermann 81 a samuel pottinger 68 raquel alegre 66
Direct Dependencies
actions:actions/checkout 16 actions:actions/setup-python 16 pypi:numpy 15 pypi:pandas 14 actions:codecov/codecov-action 9 pypi:scipy 9 pypi:matplotlib 8 actions:pypa/gh-action-pypi-publish 7 pypi:pytest 6 actions:actions/upload-artifact 6 pypi:pytest-cov 5 actions:conda-incubator/setup-miniconda 5 pypi:coverage 5 pypi:pre-commit 4 pypi:requests 4 pypi:tox 4 conda:pandas 3 conda:matplotlib 3 pypi:sphinx 3 pypi:sphinx-rtd-theme 3 actions:openjournals/openjournals-draft-action 3 actions:actions/cache 3 pypi:jupyter 3 pypi:pandera 3 pypi:pip 3 pypi:python 3 pypi:importlib-metadata 3 actions:mamba-org/setup-micromamba 3 conda:pytest-cov 3 pypi:twine 2 pypi:Sphinx 2 pypi:nbsphinx 2 pypi:ipykernel 2 conda:sphinx_rtd_theme 2 pypi:ruamel.yaml 2 pypi:networkx 2 pypi:wheel 2 pypi:bumpversion 2 pypi:biopython 2 actions:pre-commit/action 2 pypi:black 2 pypi:codecov 2 pypi:watchdog 2 pypi:tqdm 2 pypi:numpydoc 2 conda:black 2 pypi:sphinx_autodoc_typehints 2 pypi:flake8 2 conda:python 2 conda:ipython 2
Statistics

  • Projects: 22
  • Last updated: 7 months ago