https://github.com/cvs-health/langfair

LangFair is a Python library for conducting use-case level LLM bias and fairness assessments

ai ai-safety artificial-intelligence bias bias-detection ethical-ai fairness fairness-ai fairness-ml fairness-testing large-language-models llm llm-evaluation llm-evaluation-framework llm-evaluation-metrics python responsible-ai

Last synced: 13 Aug 2026

https://github.com/nialov/fractopo

fractopo is a Python package with tools for validating and analyzing lineament and fracture trace maps

analysis fractopo fracture geology geometry python spatial-analysis topology

Last synced: 13 Aug 2026

https://github.com/edwardoughton/itmlogic

Longley-Rice Irregular Terrain Model (itmlogic)

Last synced: 14 Aug 2026

https://github.com/obss/jury

Comprehensive NLP Evaluation System

datasets evaluate evaluation huggingface machine-learning metrics natural-language-processing nlp nlp-evaluation python pytorch transformers

Last synced: 13 Aug 2026

https://github.com/UM-Bridge/umbridge

UM-Bridge (the UQ and Model Bridge) provides a unified interface for numerical models that is accessible from virtually any programming language or framework.

Last synced: 13 Aug 2026

https://github.com/geodynamics/burnman

BurnMan is a Python toolkit for planetary geophysics, geochemistry and thermodynamics

Last synced: 14 Aug 2026

https://github.com/fstrozzi/bioruby-pipengine

An ultra light YAML-based pipeline execution engine

Last synced: 14 Aug 2026

https://github.com/ngsxfem/ngsxfem

Add-On to NGSolve for unfitted finite element discretizations (XFEM, CutFEM, TraceFEM, etc...)

Last synced: 13 Aug 2026

https://github.com/NatLabRockies/bifacial_radiance

Toolkit for working with RADIANCE for the ray-trace modeling of Bifacial Photovoltaics

bifacial gui photovoltaics radiance renewable-energy renewables

Last synced: 14 Aug 2026

https://github.com/swiftsim/swiftsimio

Python library for reading SWIFT data. Uses unyt and h5py.

astrophysics cosmology hdf5 particle simulation sph

Last synced: 14 Aug 2026

https://github.com/NVlabs/scene_synthesizer

Python package to create manipulation scenes.

Last synced: 13 Aug 2026

https://github.com/simupy/simupy

A framework for modeling and simulating dynamical systems

block-diagram python simulation simulation-framework simulation-modeling simulink

Last synced: 13 Aug 2026

https://github.com/prioritizr/wdpar

Interface to the World Database on Protected Areas

biodiversity conservation cran data database protected-areas r r-package rstats spatial

Last synced: 14 Aug 2026

https://github.com/PyAutoLabs/PyAutoGalaxy

PyAutoGalaxy: Open-Source Multiwavelength Galaxy Structure & Morphology

astronomy astrophysics galaxies image-processing morphology python

Last synced: 14 Aug 2026

https://github.com/earth-chris/elapid

Species distribution modeling tools, including a python implementation of Maxent

biodiversity-informatics biogeography geospatial maxent niche-modelling species-distribution-modelling

Last synced: 14 Aug 2026

https://github.com/RadioAstronomySoftwareGroup/pyradiosky

Python objects and interfaces for representing diffuse, extended and compact astrophysical radio sources

Last synced: 14 Aug 2026

https://github.com/MTgeophysics/mtpy

[DEPRECATED] Python toolbox for standard Magnetotelluric (MT) data analysis

Last synced: 13 Aug 2026

https://gitlab.com/remram44/taguette

Free and open source qualitative research tool

document hacktoberfest highlights notes qual qualitative research tagging tags text

Last synced: 14 Aug 2026

https://github.com/spglib/spgrep

On-the-fly generator of space-group irreducible representations

crystallography group-theory irreducible-representations materials-science python representation-theory

Last synced: 14 Aug 2026

https://github.com/gacou54/pyorthanc

Python library that wrap the Orthanc REST API and facilitate the manipulation of data in Orthanc

Last synced: 13 Aug 2026

https://github.com/brandondube/prysm

physical optics: integrated modeling, phase retrieval, segmented systems, polynomials and fitting, sequential raytracing...

4d diffraction forbes-polynomial gpu-computing modeling mtf mtf-mapper optics phase-retrieval phasecam propagation psf python q-polynomial raytracing trioptics wavefront wavefront-sensing zernike zygo

Last synced: 14 Aug 2026

https://github.com/inpefess/gym-saturation

a collection of Gymnasium environments for saturation provers

Last synced: 14 Aug 2026

https://gitlab.com/materials-modeling/calorine

[A python tool box for GPUMD simulations](https://calorine.materialsmodeling.org/)

atomic scale simulation condensed matter physics force constants gpumd hiphive machine learning potentials molecular dynamics neural network potentials phonons physics python thermal conductivity thermal transport

Last synced: 13 Aug 2026

https://github.com/stemangiola/tidyHeatmap

Draw heatmap simply using a tidy data frame

brewer complexheatmap custom-palette dplyr graphviz heatmap mtcars plotting r rstudio scale tibble tidy tidy-data-frame tidybulk tidyverse viridis

Last synced: 14 Aug 2026

https://github.com/alan-turing-institute/autoemulate

Emulate simulations easily

active-learning aiphys calibration emulation ensemble gaussian-processes history-matching hut23 hut23-1468 mcmc neural-networks pytorch sensitivity-analysis uncertainty-quantification

Last synced: 14 Aug 2026

https://github.com/OpenGeoVis/PVGeo

🌍 Python package of VTK-based algorithms to analyze geoscientific data and models

3d data-visualization geophysics geosciences model-building open-science paraview paraview-plugin python visual-data-integration visualization vtk

Last synced: 14 Aug 2026

https://github.com/daffidwilde/matching

A package for solving matching games

gale-shapley game-theory hospital-residents matching-game matching-problems stable-marriage

Last synced: 14 Aug 2026

https://github.com/pyplati/platipy

Processing Library and Analysis Toolkit for Medical Imaging in Python

image-analysis medical-imaging python registration segmentation visualization

Last synced: 13 Aug 2026

https://github.com/virgesmith/UKCensusAPI

UK Census Data queries and downloads from python or R

data-science python r

Last synced: 14 Aug 2026

https://github.com/openscm/pymagicc

Python wrapper for the simple climate model MAGICC

climate-model magicc-model python-wrapper

Last synced: 14 Aug 2026

https://github.com/CMakePP/CMinx

Generates API documentation for CMake functions and macros

cmake documentation-tool

Last synced: 14 Aug 2026

https://github.com/mmore500/hstrat

hstrat enables phylogenetic inference on distributed digital evolution populations

Last synced: 13 Aug 2026

https://github.com/KingsburyLab/pyEQL

A Python library for solution chemistry

Last synced: 14 Aug 2026

https://github.com/idaholab/MontePy

MontePy is the most user friendly Python library (API) to read, edit, and write MCNP input files.

api hacktoberfest mcnp mcnp6 monte-carlo neutronics radiation-transport

Last synced: 13 Aug 2026

https://gitlab.com/moorepants/skijumpdesign

A ski jump design tool for equivalent fall height. Includes a library for 2D skiing simulations and a graphical web application for designing ski jumps.

design jump simulation ski snowboard sports terrain park

Last synced: 14 Aug 2026

https://github.com/martin3141/spant

Tools for reading, visualising and processing Magnetic Resonance Spectroscopy data

brain cran mri mrs mrshub spectroscopy

Last synced: 14 Aug 2026

https://github.com/jmejia8/Metaheuristics.jl

High-performance metaheuristics for optimization coded purely in Julia.

constrained-optimization decision-making differential-evolution hypervolume multi-objective-optimization nsga2 optimization pso simulated-annealing

Last synced: 14 Aug 2026

https://github.com/HypothesisWorks/hypothesis/

The property-based testing library for Python

fuzzing property-based-testing python testing

Last synced: 13 Aug 2026

https://github.com/NeuroDiffGym/neurodiffeq

A library for solving differential equations using neural networks based on PyTorch, used by multiple research groups around the world, including at Harvard IACS.

artificial-intelligence boundary-value-problem deep-learning differential-equations initial-value-problem mathematical-modelling neural-networks ode odes pde-solver physics-informed-neural-networks pinn pypi pytorch scientific-computing time-series

Last synced: 14 Aug 2026

https://github.com/vivo-project/VIVO

VIVO is an extensible semantic web application for research discovery and showcasing scholarly work

Last synced: 13 Aug 2026

https://github.com/ornlneutronimaging/ImagingReso

Resonance Imaging

Last synced: 13 Aug 2026

https://github.com/JuliaEarth/GeoStats.jl

An extensible framework for geospatial data science and geostatistical modeling fully written in Julia

datascience geo geospatial geostatistics gis spatial-statistics statistical-learning statistics

Last synced: 13 Aug 2026

https://github.com/xarray-contrib/xeofs

Comprehensive EOF analysis in Python with xarray: A versatile, multidimensional, and scalable tool for advanced climate data analysis

climate-science dask dimensionality-reduction eof-analysis pattern-recognition pca xarray

Last synced: 14 Aug 2026

https://github.com/NCAS-CMS/cfdm

A Python reference implementation of the CF data model

aggregation atmosphere cf climate dask data data-compression forecasting metadata netcdf ocean python ugrid zarr

Last synced: 14 Aug 2026

https://github.com/siavash-saki/tesspy

Last synced: 13 Aug 2026

https://github.com/PieterjanRobbe/GaussianRandomFields.jl

A package for Gaussian random field generation in Julia

Last synced: 13 Aug 2026

https://github.com/nextstrain/nextclade

Viral genome alignment, mutation calling, clade assignment, quality checks and phylogenetic placement

clade clades coronavirus covid covid-19 covid19 dna influenza ncov neherlab next-generation-sequencing nextstrain research rna sars-cov-2 science sequences sequencing strain virus

Last synced: 14 Aug 2026

https://github.com/cdslaborg/paramonte

ParaMonte: Parallel Monte Carlo and Machine Learning Library for Python, MATLAB, Fortran, C++, C.

adaptive-learning bayesian-inference bayesian-statistics c cpp fortran machine-learning machine-learning-algorithms machine-learning-library markov-chain matlab mcmc monte-carlo monte-carlo-simulations mpi numerical-integration openmp python sampling

Last synced: 14 Aug 2026

https://github.com/ml-evs/matador

⚗️ matador is an aggregator, manipulator and runner of first-principles calculations, written with a bent towards battery 🔋 electrode materials.

computational-chemistry materials-science python

Last synced: 14 Aug 2026

https://github.com/matt002/GaitPy

Last synced: 14 Aug 2026

https://github.com/kgjerde/corporaexplorer

An R package for dynamic exploration of text collections

corpora corpus r shiny text-analysis

Last synced: 14 Aug 2026

https://github.com/UCBerkeleySETI/blimpy

Breakthrough Listen I/O Methods for Python

Last synced: 13 Aug 2026

https://github.com/NorskRegnesentral/shapr

Explaining the output of machine learning models with more accurately estimated Shapley values

explainable-ai explainable-ml rcpp rcpparmadillo rstats shapley

Last synced: 14 Aug 2026

https://gitlab.com/emd-dev/emd

Empirical Mode Decomposition in Python <a href="https://gitlab.com/ajquinn/emd/commits/master"><img alt="pipeline status" src="https://gitlab.com/ajquinn/emd/badges/master/pipeline.svg" /></a>

Last synced: 14 Aug 2026

https://github.com/PeteHaitch/GenomicTuples

Representation and Manipulation of Genomic Tuples in R

Last synced: 13 Aug 2026

https://github.com/DeepRank/pdb2sql

Fast and versatile biomolecular structure PDB file parser using SQL queries

Last synced: 14 Aug 2026

https://github.com/lilyminium/psiresp

RESP with inter- and intra-molecular constraints in Psi4.

atomic-charges molecular-dynamics psi4 python

Last synced: 14 Aug 2026

https://github.com/Natsiopoulos/ARDL

ARDL, ECM and Bounds-Test for Cointegration

Last synced: 14 Aug 2026

https://github.com/RWTH-EBC/FiLiP

FIWARE Library for Python (FiLiP) to work with FIWARE API

fiware fiware-iot-agents fiware-ngsi-v2 fiware-orion fiware-quantum-leap hacktoberfest iot maintained python tool

Last synced: 13 Aug 2026

https://github.com/FZJ-IEK3-VSA/FINE

The ETHOS.FINE python package provides a framework for modeling, optimizing and assessing energy systems

Last synced: 13 Aug 2026

https://github.com/Hoosier-Clusters/clusim

An extended package for clustering similarity

Last synced: 14 Aug 2026

https://github.com/jonescompneurolab/hnn-core

Simulation and optimization of neural circuits for MEG/EEG source estimates

computational-modeling eeg meg neuron-simulator

Last synced: 14 Aug 2026

https://github.com/underworldcode/stripy

2D spherical and Cartesian triangulation toolkit using tripack, stripack, srfpack and ssrfpack

fortran meshes python spherical-geometry triangulation-delaunay

Last synced: 13 Aug 2026

https://github.com/sambit-giri/tools21cm

21-cm-cosmology 21-cm-powerspectrum cosmic-dawn epoch-of-reionization reionization

Last synced: 14 Aug 2026

https://github.com/sambitdash/PDFIO.jl

PDF Reader Library for Native Julia.

julia pdf pdf-development pdf-document pdf-files pdf-library pdf-specification text-extraction

Last synced: 14 Aug 2026

https://github.com/aymgal/COOLEST

Standard for strong gravitational lensing analyses

astrophysics gravitational-lensing lens-modeling standardization

Last synced: 13 Aug 2026

https://github.com/DeepRegNet/DeepReg

Medical image registration using deep learning

convolutional-neural-networks deep-learning deep-neural-networks deepreg image-fusion image-registration medical-image-registration neural-network tensorflow2

Last synced: 14 Aug 2026

https://github.com/SciML/GlobalSensitivity.jl

Robust, Fast, and Parallel Global Sensitivity Analysis (GSA) in Julia

differential-equations efast global-sensitivity-analysis gsa julia julia-language julialang morris-method ode ordinary-differential-equations scientific-machine-learning sciml sensitivity-analysis sobol-method

Last synced: 14 Aug 2026

https://github.com/coleygroup/pyscreener

pythonic interface to virtual screening software

computational-biology distributed-computing molecular-docking ray virtual-screening

Last synced: 14 Aug 2026

https://github.com/ImperialCollegeLondon/PyProBE

Python Processing for Battery Experiments

Last synced: 13 Aug 2026

https://github.com/pangeo-data/climpred

:earth_americas: Verification of weather and climate forecasts :earth_africa:

climate climate-analysis dask forecasting pangeo prediction python s2d s2s xarray

Last synced: 14 Aug 2026

https://github.com/lanl/scico

Scientific Computational Imaging COde

admm computational-imaging convex-optimization fista inverse-problems jax optimization plug-and-play-priors proximal-algorithms proximal-operators total-variation

Last synced: 14 Aug 2026

https://github.com/bcgov/bcdata

An R package for searching & retrieving data from the B.C. Data Catalogue

bcdc citz data-science env r r-package rstats

Last synced: 14 Aug 2026

https://github.com/dgbowl/yadg

yadg: yet another datagram

batteries catalysis chromatography data-science electrochemistry parser

Last synced: 14 Aug 2026

https://github.com/netsiphd/netrd

A library for network {reconstruction, distances, dynamics}

Last synced: 14 Aug 2026

https://github.com/OnroerendErfgoed/atramhasis

An online SKOS editor

app pypi-package python skos thesaurus vocabulary

Last synced: 13 Aug 2026

https://github.com/jeremiecoullon/SGMCMCJax

Lightweight library of stochastic gradient MCMC algorithms written in JAX.

bayesian-inference jax sampling-methods

Last synced: 14 Aug 2026

https://github.com/JuliaGeodynamics/GeophysicalModelGenerator.jl

Import, process and interpret geophysical data sets to be used in numerical models.

Last synced: 14 Aug 2026

https://github.com/galsci/pysm

PySM 3: Sky emission simulations for Cosmic Microwave Background experiments

cosmic-microwave-background cosmology healpix healpy mpi python

Last synced: 14 Aug 2026

https://github.com/handley-lab/fgivenx

Functional Posterior Plotter

astrophysics astrostatistics bayesian-inference cosmology matplotlib plotting statistics

Last synced: 13 Aug 2026

https://github.com/pybamm-team/liionpack

A battery pack simulation tool that uses the PyBaMM framework

Last synced: 13 Aug 2026

https://github.com/KVSlab/morphMan

A collection of tools for manipulation of morphological features in patient-specific geometries

biomedical geometric-algorithms morphology vascular

Last synced: 13 Aug 2026

https://github.com/vortex-exoplanet/VIP

VIP is a python package/library for angular, reference star and spectral differential imaging for exoplanet/disk detection through high-contrast imaging.

data-processing extrasolar-planets-disks high-contrast-imaging image-processing low-rank-approximation mcmc pca

Last synced: 14 Aug 2026

https://github.com/BioSTEAMDevelopmentGroup/thermosteam

BioSTEAM's Premier Thermodynamic Engine

chemical chemical-engineering equations-of-state liquid-liquid-equilibrium material-and-energy-balance mixture properties reaction thermodynamics vapor-liquid-equilibrium

Last synced: 14 Aug 2026

https://github.com/springer-math/Mathematics-of-Epidemics-on-Networks

Source code accompanying 'Mathematics of Epidemics on Networks' by Kiss, Miller, and Simon http://www.springer.com/us/book/9783319508047 . Documentation for the software package is at https://epidemicsonnetworks.readthedocs.io/en/latest/

Last synced: 14 Aug 2026

https://github.com/ralna/GALAHAD

A library of modern Fortran modules for nonlinear optimization

c cubic-regularization-methods fortran julia mathematical-programming matlab nonlinear-least-squares nonlinear-optimization numerical-optimization python quadratic-programming trust-region-methods

Last synced: 14 Aug 2026

https://github.com/tlverse/hal9001

🤠 📿 The Highly Adaptive Lasso

cross-validation lasso-regression machine-learning-algorithms nonparametric-regression

Last synced: 14 Aug 2026

https://github.com/xoopR/set6

R6 object-oriented interface for mathematical sets.

intervals oop r r6 sets

Last synced: 14 Aug 2026

https://github.com/jameschapman19/cca_zoo

Canonical Correlation Analysis Zoo: A collection of Regularized, Deep Learning based, Kernel, and Probabilistic methods in a scikit-learn style framework

canonical-correlation-analysis cca cca-zoo dcca deep kernel multiset-cca multiview pls pytorch tensor-cca

Last synced: 14 Aug 2026

https://github.com/delira-dev/delira

Lightweight framework for fast prototyping and training deep neural networks with PyTorch and TensorFlow

deep-learning delira machine-learning medical-images medical-imaging pytorch radiology tensorflow

Last synced: 13 Aug 2026

https://github.com/ronikobrosly/causal-curve

A python package with tools to perform causal inference using observational data when the treatment of interest is continuous.

Last synced: 14 Aug 2026

https://github.com/davidpagnon/Sports2D

Compute 2D human pose and angles from a video or a webcam.

biomechanics blazepose joint-angles kinematics kinovea markerless openpose pose-estimation rtmpose sports-analytics

Last synced: 14 Aug 2026

https://github.com/bessagroup/f3dasm

Framework for Data-Driven Design & Analysis of Structures & Materials (F3DASM)

computational-mechanics data-driven design-of-experiments framework machine-learning materials-science

Last synced: 14 Aug 2026

https://github.com/ytree-project/ytree

A Python package for analyzing tree data and especially merger trees.

analysis astronomy astrophysics data merger-trees python simulations trees

Last synced: 14 Aug 2026

https://github.com/beringresearch/ivis

Dimensionality reduction in very large datasets using Siamese Networks

data-visualization dimensionality-reduction machine-learning neural-network siamese-neural-network

Last synced: 14 Aug 2026

https://github.com/ellessenne/comorbidity

An R package for computing comorbidity scores.

comorbidity r rstats

Last synced: 13 Aug 2026

https://github.com/lrnv/Copulas.jl

A fully `Distributions.jl`-compliant copula package

copula julia

Last synced: 14 Aug 2026

https://github.com/TomKellyGenetics/graphsim

R package: Simulate Expression data from igraph network using mvtnorm (CRAN; JOSS)

benchmarking gene-expression gene-regulatory-networks genetics genomic-data-analysis genomics graph-algorithms igraph-networks joss ngs-analysis package r-stats simulated-data simulation-modeling

Last synced: 14 Aug 2026

https://github.com/UNSW-CEEM/nempy

A Python package for modelling the Australian National Electricity Market dispatch procedure

Last synced: 14 Aug 2026

https://github.com/HBClab/NiBetaSeries

Nipype implementation of BetaSeries Correlations (Beta)

Last synced: 13 Aug 2026