https://github.com/mprib/caliscope
Multicamera Calibration for Motion Capture Workflows
bundle-adjustment camera-calibration extrinsic-calibration intrinsic-calibration motion-capture-mocap motion-capture-processing open-source
Last synced: 22 Aug 2026
https://github.com/duxfrederic/lightcurver
A pipeline for precise extraction of light curves through forward modelling of a region from time-series wide-field astronomical images
astronomy observational-cosmology photometry photometry-pipeline
Last synced: 22 Aug 2026
https://gitlab.com/free-astro/siril
The Siril image processing software for amateur astronomy
astronomy image processing software linux osx preprocessing windows
Last synced: 22 Aug 2026
https://github.com/cau-se/ARCHES-PiCar-X
Software for digital twin research
Last synced: 22 Aug 2026
https://github.com/finsberg/gotranx
Next generation ODE translator
code-generation gotran ode parser parsing
Last synced: 22 Aug 2026
https://github.com/mendezVKI/MODULO
MODULO (MODal mULtiscale pOd) is a software developed at the von Karman Institute to perform Multiscale Modal Analysis of numerical and experimental data using the mPOD.
Last synced: 22 Aug 2026
https://github.com/adamantine-sim/adamantine
Software to simulate heat transfer for additive manufacturing
3d-printing heat-transfer simulation
Last synced: 22 Aug 2026
https://github.com/lxvm/AutoBZ.jl
Automatic and adaptive BZ integration for electronic properties
Last synced: 22 Aug 2026
https://github.com/BattModels/asimtools
Optimized workflow management and script handling for atomistic simulations
Last synced: 22 Aug 2026
https://github.com/USEPA/harmonize-wq
Standardize, clean, and wrangle Water Quality Portal data into more analytic-ready formats
ord research
Last synced: 22 Aug 2026
https://github.com/gaelforget/MITgcm.jl
Julia interface to MITgcm
adjoint adjoint-sensitivities biogeochemistry climate climate-model climate-science ecology model ocean ocean-modelling ocean-sciences particles seaice tracers transport
Last synced: 22 Aug 2026
https://github.com/marccanby/linguiphyr/
Linguistic Phylogenetic Analysis in R
Last synced: 22 Aug 2026
https://github.com/athob/py-ananke
Python pipeline to generate mock astrometric and photometric catalogs of synthetic stars derived from particle-based simulated star populations
Last synced: 22 Aug 2026
https://github.com/trchudley/pdemtools
Conveniently search, download, and process ArcticDEM and REMA products
arcticdem coregistration dem digital-elevation-model geospatial glaciers glaciology polar-geospatial-center python rema terrain-analysis
Last synced: 22 Aug 2026
https://github.com/manzt/anywidget
reusable widgets made easy
jupyter marimo python widgets
Last synced: 22 Aug 2026
https://github.com/Parcels-code/plasticparcels
Repository for PlasticParcels tool
Last synced: 22 Aug 2026
https://github.com/tinawunderlich/MultichannelGPR
A collection of MATLAB scripts for proccesing and visualization of (Multichannel) GPR data
Last synced: 22 Aug 2026
https://github.com/NOSALRO/robot_dart
RobotDART: a versatile robot simulator for robotics and machine learning researchers
dart eigen3 magnum
Last synced: 22 Aug 2026
https://github.com/METHODS-Group/DRDMannTurb
Data-driven synthetic turbulence generation based on the Mann model
Last synced: 22 Aug 2026
https://github.com/stegmaja/TSE
Triple stellar evolution code
astrophysics black-holes dynamics gravitational-waves lidov-kozai stellar-evolution three-body-problem three-body-simulation
Last synced: 22 Aug 2026
https://github.com/WilliamLwj/PyXAB
PyXAB - A Python Library for X-Armed Bandit and Online Blackbox Optimization Algorithms
algorithm automl bandit-algorithms blackbox-optimization continuous-armed-bandit data-science hyperparameter-optimization hyperparameter-tuning lipschitz-bandit machine-learning machine-learning-algorithms online-learning optimization optimization-algorithms reinforcement-learning x-armed-bandit
Last synced: 22 Aug 2026
https://github.com/stingraysoftware/stingray
Anything can happen in the next half hour (including spectral timing made easy)!
astronomy astrophysics blackhole blackholes data-analysis fourier-analysis fourier-transform hacktoberfest neutronstars pulsars time-series time-series-analysis timeseries x-ray x-ray-binaries
Last synced: 22 Aug 2026
https://github.com/retostauffer/python-colorspace
Python colorspace implementation. Documentation available on https://retostauffer.github.io/python-colorspace/. The latest release is available via the Python Package Index (PyPI) via https://pypi.org/project/colorspace/
Last synced: 22 Aug 2026
https://github.com/uw-comphys/openccm
OpenCCM is a CFD-based compartment modelling software package. It is primarily intended for convection dominated reactive flows which feature a weak or one-way coupling between the reactive species and the carrier fluid, i.e. the reaction does not substantially influence the fluid flow over the course of the simulation.
Last synced: 22 Aug 2026
https://github.com/dominic-chang/Krang.jl
Fast analytic raytracing around Kerr black holes
automatic-differentiation black-hole general-relativity gpu-acceleration julia kerr raytracer raytracing
Last synced: 22 Aug 2026
https://github.com/brocklab/pycashier
cash in on DNA barcode tags
bioinformatics pipeline
Last synced: 22 Aug 2026
https://github.com/FaaSr/FaaSr-package-v1
Function-as-a-Service package for R
Last synced: 22 Aug 2026
https://github.com/tvwenger/bayes_spec
A Bayesian Spectral Line Modeling Framework
Last synced: 22 Aug 2026
https://github.com/JuliaGeodynamics/GeophysicalModelGenerator.jl
Import, process and interpret geophysical data sets to be used in numerical models.
Last synced: 22 Aug 2026
https://github.com/konkolyseismolab/seismolab
Open-source python framework for downloading, analyzing, and visualizing data of variable stars from space-based surveys.
Last synced: 22 Aug 2026
https://github.com/lanl/singularity-eos
Performance portable equations of state and mixed cell closures
Last synced: 22 Aug 2026
https://github.com/ShaunFell/GRBoondi
An AMR-based open source code to evolve generalized Proca fields on arbitrary fixed backgrounds
general-relativity numerical-relativity
Last synced: 22 Aug 2026
https://github.com/meixichen/SpatialGEV
An efficient computational method for fitting spatial extreme value models
Last synced: 22 Aug 2026
https://github.com/brainets/hoi
Higher-Order Interactions
higher-order-interactions hoi jax network python
Last synced: 22 Aug 2026
https://github.com/alan-turing-institute/setvis
A tool for visualising set membership and patterns of missingness in data
bokeh hut23 hut23-845 jupyter-notebook missing-data python set-visualization
Last synced: 22 Aug 2026
https://github.com/kellino/DiscreteEntropy.jl
Estimation of Shannon Entropy for Discrete Random Variables
Last synced: 22 Aug 2026
https://github.com/hugoledoux/startinpy
A Python library for modelling and processing 2.5D terrains using a (2D) Delaunay triangulation.
delaunay-triangulation gis interpolation terrain tin
Last synced: 22 Aug 2026
https://github.com/WaterFutures/EPyT-Flow
A Python package designed for the easy generation of hydraulic and water quality scenario data of water distribution networks.
epanet epanet-python-toolkit hydraulics python simulation water water-distribution-networks
Last synced: 22 Aug 2026
https://github.com/timothyas/xesn
Large scale Echo State Networks powered by xarray and dask.
Last synced: 22 Aug 2026
https://github.com/BirkhoffG/jax-relax/
Recourse Explanation Library in JAX
Last synced: 22 Aug 2026
https://github.com/ldliao/jointVIP
Prioritize variables in observational study design through the joint variable importance plot; shiny app: https://ldliao.shinyapps.io/jointVIP/
causal-inference observational-study r rstats study-design
Last synced: 22 Aug 2026
https://github.com/isce-framework/dolphin
InSAR phase linking library for creating surface displacement maps using persistent scatterer (PS) and distributed scatterer (DS) processing
deformation geoscience geospatial-processing insar phase-linking remote-sensing squeesar time-series
Last synced: 22 Aug 2026
https://github.com/ptaconet/modisfast
Fast and efficient access to MODIS, VIIRS and GPM Earth Observation data with R
data-cube earth-science-data environmental-data gpm land modis nasa opendap precipitation-data r temperature-data vegetation-data viirs
Last synced: 22 Aug 2026
https://github.com/DavidLapous/multipers
Python library for multiparameter persistence
cpp cython icml-2024 multiparameter-persistence neurips-2023 persistent-homology python tda topological-data-analysis
Last synced: 22 Aug 2026
https://github.com/amkrajewski/nimCSO
nim Composition Space Optimization is a high-performance tool leveraging metaprogramming to implement several methods for selecting components (data dimensions) in compositional datasets, as to optimize the data availability and density for applications such as machine learning.
data-analysis data-optimization data-science materials-informatics metaprogramming nim nim-lang
Last synced: 22 Aug 2026
https://github.com/baiyueh/PANINIpy
[MOVED] → github.com/HKU-Complex-Networks-Lab/PANINIpy
archived moved
Last synced: 22 Aug 2026
https://github.com/sumn2u/annotate-lab
Annotate-lab is an open-source image annotation tool for efficient dataset creation. With an intuitive interface and flexible export options, it streamlines your machine learning workflow. 🖼️✏️📑
annotation-tool classification collaborate computer-vision image-annotation image-labeling image-masking image-segmentation machine-learning python react segmentation
Last synced: 22 Aug 2026
https://forge.inrae.fr/migale/easy16s
Server : https://shiny.migale.inrae.fr/app/easy16S | Doc : https://easy16s.migale.inrae.fr/
Last synced: 22 Aug 2026
https://github.com/sharmalab/eaglescope
Hierarchical and Cohort Visualization
Last synced: 22 Aug 2026
https://github.com/bobleesj/cifkit
High-throughput .cif analysis made easy. DOI: https://doi.org/10.21105/joss.07205
coordination-environment crystallography high-throughput site-analysis solid-state
Last synced: 22 Aug 2026
https://github.com/Bios4Biol/intronSeeker
IntronSeeker identifies potentially retained introns in de novo RNA-seq assembly in order to quantify and remove them.
Last synced: 22 Aug 2026
https://github.com/LandSciTech/ccviR
Implement NatureServe climate change vulnerability index in R
Last synced: 22 Aug 2026
https://github.com/PSims/BayesEoR
Code to estimate the power spectrum of redshifted 21-cm emission from interferometric observations, within a Bayesian forward modelling framework.
Last synced: 22 Aug 2026
https://github.com/Qile0317/APackOfTheClones
Visualize clonal expansion via circle-packing. 'APackOfTheClones' extends 'scRepertoire' to produce a publication-ready visualization of clonal expansion at a single cell resolution, by representing expanded clones as differently sized circles.
clonal-analysis immune-repertoire immune-system r scrna-seq scrnaseq seurat single-cell single-cell-genomics
Last synced: 22 Aug 2026
https://github.com/LDEO-CREW/Pythonic-DISORT
Discrete Ordinates Solver for the (1D) Radiative Transfer Equation in a single or multi-layer plane-parallel atmosphere. Coded entirely in Python 3. Based on Stamnes' FORTRAN DISORT (see references in the Jupyter Notebook) and has its main features.
atmospheric-modelling discrete-ordinates-method disort python radiative-transfer radiative-transfer-models
Last synced: 22 Aug 2026
https://github.com/polca/pathways
Scenario-wide Life Cycle Assessment
energy lca prospective scenario
Last synced: 22 Aug 2026
https://github.com/IPESE/REHO
Decision Support Tool for Renewable Energy Communities
Last synced: 22 Aug 2026
https://github.com/alixlam/fmristroke
Adding quality checks and confounds computation steps to fmriprep for stroke data.
Last synced: 22 Aug 2026
https://github.com/signalling-games-org/evoke
A Python package for evolutionary signalling games
Last synced: 22 Aug 2026
https://github.com/swiss-seismological-service/DUGseis
Software for acquisition and processing of micro-seismic data
Last synced: 22 Aug 2026
https://gitlab.com/davidwoodburn/itrm
Interactive Terminal Utilities
ascii-art interactive plotting terminal
Last synced: 22 Aug 2026
https://github.com/PFPE/shipgrav
Marine gravity processing for UNOLS (Python)
Last synced: 22 Aug 2026
https://github.com/Ciela-Institute/caustics
A gravitational lensing simulator for the machine learning era.
gravitational-lensing pytorch
Last synced: 22 Aug 2026
https://github.com/PIK-LPJmL/lpjmlkit
A collection of basic functions to facilitate the work with the DGVM LPJmL hosted at the Potsdam Institute for Climate Impact Research. It provides functions for running LPJmL, as well as reading, processing and writing model-related data such as inputs and outputs or configuration files.
cran r r-package
Last synced: 22 Aug 2026
https://github.com/BleekerLab/PhenoFeatureFinder
A Python package dedicated to identifying plant metabolite features related to insect resistance
Last synced: 22 Aug 2026
https://github.com/RemieJanssen/phylox
A python package with tools for constructing, manipulating, and analyzing phylogenetic networks.
Last synced: 22 Aug 2026
https://github.com/VicidominiLab/BrightEyes-MCS
BrightEyes Microscope Control Suite
Last synced: 22 Aug 2026
https://github.com/Wytamma/snk
Snakemake workflow management system and CLI generation tool
Last synced: 22 Aug 2026
https://github.com/swiss-armed-forces/openburst
Software framework for the development and testing of sensor coverage and real-time air target detection analysis.
air coverage pcl pet radar surveillance
Last synced: 22 Aug 2026
https://github.com/dftd3/simple-dftd3
Library first implementation of the D3 dispersion correction
ase computational-chemistry counter-poise-correction dispersion-correction fortran-package-manager pyscf qcschema quantum-chemistry
Last synced: 22 Aug 2026
https://github.com/anugrahjo/PySLSQP
A transparent Python interface to the SLSQP optimization algorithm, with advanced features and visualization capabilities.
nonlinear-optimization optimization optimization-algorithms slsqp
Last synced: 22 Aug 2026
https://github.com/vnmabus/rdata
A Python library for R datasets.
conversion python python3 r rda rdata rds
Last synced: 22 Aug 2026
https://github.com/dfki-ric/ugv_nav4d
A 4D (X,Y,Z, Theta) Planner for Unmanned Ground Vehicles
navigation planning-algorithms robotics sbpl
Last synced: 22 Aug 2026
https://github.com/dodge-research-group/thztools
Tools for terahertz time-domain spectroscopy (THz-TDS)
condensed-matter-physics data-analysis optics spectroscopy terahertz time-domain
Last synced: 22 Aug 2026
https://github.com/ORNL/dasp-stacker
Dimensionally Aligned Signal Processing Algorithms
Last synced: 22 Aug 2026
https://github.com/AthinaLange/CoastalLens
Toolbox to rectify UAV video in coastal oceanography
Last synced: 22 Aug 2026
https://github.com/cdjellen/ndbc-api
A Python API for retrieving meteorological and oceanographic data from the National Data Buoy Center (NDBC).
climate-data data-science noaa python3
Last synced: 22 Aug 2026
https://github.com/kumiori/irrevolutions
Computing Irreversible Evolutions
energy evolutionary-algorithms fracture fracture-mechanics nonlinear-systems stability-analysis
Last synced: 22 Aug 2026
https://github.com/AutoResearch/autora-paper
Hosts the JOSS submission for the autora framework.
Last synced: 22 Aug 2026
https://github.com/PLN-team/pyPLNmodels
Blazing fast inference of PLN models built on top of Python and PyTorch
Last synced: 22 Aug 2026
https://github.com/amisr/amisrsynthdata
Module for generating synethetic AMISR data files
Last synced: 22 Aug 2026
https://github.com/Infineon/StreamGen
Python framework for generating streams of labeled data.
continual-learning data-generation data-streams data-structures function-composition python
Last synced: 22 Aug 2026
https://github.com/arfc/osier
Justice oriented energy system optimization framework
Last synced: 22 Aug 2026
https://github.com/GOMC-WSU/MoSDeF-dihedral-fit/
MoSDeF-dihedral-fit: A simple software package to fit dihedrals via the MoSDeF software
Last synced: 22 Aug 2026
https://github.com/Magritte-code/pomme
Bayesian model reconstruction based on astronomical spectral line observations.
3d-reconstruction astronomy-astrophysics astronomy-software interferometry inverse-problem spectral-lines
Last synced: 22 Aug 2026
https://github.com/PyTomography/SlicerSPECTRecon
A 3D Slicer extension for SPECT reconstruction, built using PyTomography
3d-slicer-extension image-reconstruction
Last synced: 22 Aug 2026
https://github.com/quanted/esat
EPA's Environmental Source Apportionment Toolkit (ESAT) python package
Last synced: 22 Aug 2026
https://github.com/trixi-framework/HOHQMesh
High Order Hex-Quad Mesh (HOHQMesh) package to automatically generate all-quadrilateral meshes with high order boundary information.
geometry high-order-methods mesh-generation
Last synced: 22 Aug 2026
https://github.com/JuBiotech/peak-performance/
A Python toolbox for Bayesian inference of peak areas.
bayesian-inference hplc liquid-chromatography mass-spectrometry metabolomics
Last synced: 22 Aug 2026
https://gitlab.dune-project.org/copasi/dune-copasi
Solver for reaction-diffusion systems in multiple compartments
Diffusion-Reaction Finite Element Method (FEM) Multiple domains
Last synced: 22 Aug 2026
