JOSS: https://github.com/Qile0317/APackOfTheClones

clonal-analysis immune-repertoire immune-system r scrna-seq scrnaseq seurat single-cell single-cell-genomics

Score: 9.672185813520453

Last synced: about 12 hours ago
JSON representation

Repository metadata:

Visualize clonal expansion via circle-packing. 'APackOfTheClones' extends 'scRepertoire' to produce a publication-ready visualization of clonal expansion at a single cell resolution, by representing expanded clones as differently sized circles.

• Host: GitHub
• URL: https://github.com/Qile0317/APackOfTheClones
• Owner: Qile0317
• License: other
• Created: 2022-10-14T23:09:09.000Z (over 3 years ago)
• Default Branch: main
• Last Pushed: 2025-08-28T21:54:25.000Z (10 months ago)
• Last Synced: 2026-05-30T10:04:47.245Z (22 days ago)
• Topics: clonal-analysis, immune-repertoire, immune-system, r, scrna-seq, scrnaseq, seurat, single-cell, single-cell-genomics
• Language: R
• Homepage: https://qile0317.github.io/APackOfTheClones/
• Size: 182 MB
• Stars: 21
• Watchers: 0
• Forks: 2
• Open Issues: 2
• Metadata Files:
  • Readme: README.md
  • Changelog: NEWS.md
  • Contributing: CONTRIBUTING.md
  • License: LICENSE
  • Code of conduct: CODE_OF_CONDUCT.md
  • Citation: CITATION.cff

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Owner metadata:

• Name: Qile
• Login: Qile0317
• Email:
• Kind: user
• Description: high school senior with interest in bioinformatics/ML
• Website: qile0317.github.io
• Location: Sweden
• Twitter:
• Company: IEGS
• Icon url: https://avatars.githubusercontent.com/u/43093685?u=d48ab9b51e1be481d1a9a419a0f1d042379c55ec&v=4
• Repositories: 3
• Last Synced at: 2023-04-07T14:21:07.311Z
• Profile URL: https://github.com/Qile0317

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GitHub Events

Total

• Create event: 1
• Fork event: 1
• Issue comment event: 11
• Issues event: 8
• Pull request event: 5
• Pull request review comment event: 2
• Pull request review event: 3
• Push event: 66
• Release event: 1
• Watch event: 3
• Total: 101

Last Year

• Issue comment event: 5
• Issues event: 2
• Pull request event: 1
• Pull request review comment event: 2
• Pull request review event: 3
• Push event: 24
• Total: 37

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Committers metadata

Last synced: 10 days ago

Name	Email	Commits
Qile0317	q****7@g****m	521

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Issue and Pull Request metadata

Last synced: 3 months ago

More stats: https://issues.ecosyste.ms/repositories/lookup?url=https://github.com/Qile0317/APackOfTheClones

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Package metadata

• Total packages: 3
• Total downloads:
  • cran: 689 last-month
• Total dependent packages: 0 (may contain duplicates)
• Total dependent repositories: 0 (may contain duplicates)
• Total versions: 30
• Total maintainers: 1

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Dependencies