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JOSS: https://github.com/nhejazi/biotmle

bioconductor bioconductor-package bioconductor-packages bioinformatics biomarker-discovery biostatistics causal-inference computational-biology machine-learning r statistics targeted-learning

Score: 4.025351690735149

Last synced: about 3 hours ago
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Repository metadata:

:package: :microscope: R/biotmle: Targeted Learning with Moderated Statistics for Biomarker Discovery


Owner metadata:


GitHub Events

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Last Year

Committers metadata

Last synced: 8 months ago

Total Commits: 283
Total Committers: 8
Avg Commits per committer: 35.375
Development Distribution Score (DDS): 0.074

Commits in past year: 0
Committers in past year: 0
Avg Commits per committer in past year: 0.0
Development Distribution Score (DDS) in past year: 0.0

Name Email Commits
Nima Hejazi n****h@n****g 262
Nitesh Turaga n****a@g****m 10
vobencha v****a@g****m 2
Philippe Boileau p****m@g****m 2
Hervé Pagès h****s@f****g 2
vobencha v****n@r****g 2
Herve Pages h****s@f****g 2
Martin Morgan m****n@f****g 1

Issue and Pull Request metadata

Last synced: 10 months ago

Total issues: 40
Total pull requests: 38
Average time to close issues: 3 months
Average time to close pull requests: 6 days
Total issue authors: 8
Total pull request authors: 2
Average comments per issue: 1.55
Average comments per pull request: 0.13
Merged pull request: 37
Bot issues: 0
Bot pull requests: 0

Past year issues: 0
Past year pull requests: 0
Past year average time to close issues: N/A
Past year average time to close pull requests: N/A
Past year issue authors: 0
Past year pull request authors: 0
Past year average comments per issue: 0
Past year average comments per pull request: 0
Past year merged pull request: 0
Past year bot issues: 0
Past year bot pull requests: 0

More stats: https://issues.ecosyste.ms/repositories/lookup?url=https://github.com/nhejazi/biotmle

Top Issue Authors

  • nhejazi (31)
  • dcpattie (3)
  • wilsoncai1992 (1)
  • HenrikBengtsson (1)
  • PhilBoileau (1)
  • courtneyschiffman (1)
  • BiaoLiu2017 (1)
  • karthik (1)

Top Pull Request Authors

  • nhejazi (37)
  • PhilBoileau (1)

Top Issue Labels

  • enhancement (15)
  • bug (12)
  • question (6)
  • TODO (5)
  • feature request (3)
  • wontfix (2)
  • help wanted (1)

Top Pull Request Labels

  • enhancement (10)
  • bug (3)
  • feature request (1)

Dependencies

DESCRIPTION cran
  • R >= 4.0 depends
  • BiocGenerics * imports
  • BiocParallel * imports
  • S4Vectors * imports
  • SummarizedExperiment * imports
  • assertthat * imports
  • dplyr * imports
  • drtmle >= 1.0.4 imports
  • ggplot2 * imports
  • ggsci * imports
  • limma * imports
  • methods * imports
  • stats * imports
  • superheat * imports
  • tibble * imports
  • BiocStyle * suggests
  • DBI * suggests
  • Matrix * suggests
  • SuperLearner * suggests
  • arm * suggests
  • biotmleData >= 1.1.1 suggests
  • earth * suggests
  • knitr * suggests
  • ranger * suggests
  • rmarkdown * suggests
  • testthat * suggests