JOSS: https://github.com/MonashBioinformaticsPlatform/varistran
Score: 3.7376696182833684
Last synced: about 3 hours ago
JSON representation
Repository metadata:
R package providing Variance Stabilizing Transformations appropriate for RNA-Seq data
- Host: GitHub
- URL: https://github.com/MonashBioinformaticsPlatform/varistran
- Owner: MonashBioinformaticsPlatform
- License: lgpl-2.1
- Created: 2015-08-12T01:37:48.000Z (almost 11 years ago)
- Default Branch: master
- Last Pushed: 2025-05-23T02:34:03.000Z (about 1 year ago)
- Last Synced: 2025-11-30T16:05:59.343Z (7 months ago)
- Language: R
- Size: 1.05 MB
- Stars: 21
- Watchers: 14
- Forks: 3
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
- Changelog: NEWS.md
- License: LICENSE
- Codemeta: codemeta.json
CodeMeta metadata:
- @context: https://raw.githubusercontent.com/mbjones/codemeta/master/codemeta.jsonld
- @type: Code
- Author:
- @id: 0000-0002-3980-268X
- @type: Person
- Email: paul.harrison@monash.edu
- Name: Paul Harrison
- Affiliation: Monash Bioinformatics Platform, Monash University
- Identifier:
- Code repository: https://github.com/MonashBioinformaticsPlatform/varistran
- Date published: 2017-03-13
- Date modified: 2017-03-13
- Date created: 2017-03-13
- Description: Anscombe's variance stabilizing transformation for RNA-seq gene expression data.
- Keywords: RNA-seq, gene expression, variance stabilizing transformation, R package
- License: LGPL v2.1
- Title: Varistran
- Version: v1.0.1
Owner metadata:
- Name: Monash Bioinformatics Platform
- Login: MonashBioinformaticsPlatform
- Email: bioinformatics.platform@monash.edu
- Kind: organization
- Description:
- Website: https://platforms.monash.edu/bioinformatics/
- Location: Monash University, Australia
- Twitter:
- Company:
- Icon url: https://avatars.githubusercontent.com/u/11252230?v=4
- Repositories: 84
- Last Synced at: 2024-04-23T11:36:49.184Z
- Profile URL: https://github.com/MonashBioinformaticsPlatform
GitHub Events
Total
- Create event: 2
- Issues event: 1
- Push event: 17
- Release event: 1
- Watch event: 2
- Total: 23
Last Year
- Create event: 2
- Issues event: 1
- Push event: 17
- Release event: 1
- Watch event: 2
- Total: 23
Committers metadata
Last synced: 7 months ago
Total Commits: 116
Total Committers: 2
Avg Commits per committer: 58.0
Development Distribution Score (DDS): 0.009
Commits in past year: 17
Committers in past year: 1
Avg Commits per committer in past year: 17.0
Development Distribution Score (DDS) in past year: 0.0
| Name | Commits | |
|---|---|---|
| Paul Harrison | p****h@l****t | 115 |
| roryk | r****r@g****m | 1 |
Issue and Pull Request metadata
Last synced: 10 months ago
Total issues: 2
Total pull requests: 1
Average time to close issues: over 1 year
Average time to close pull requests: 15 minutes
Total issue authors: 2
Total pull request authors: 1
Average comments per issue: 3.0
Average comments per pull request: 0.0
Merged pull request: 1
Bot issues: 0
Bot pull requests: 0
Past year issues: 0
Past year pull requests: 0
Past year average time to close issues: N/A
Past year average time to close pull requests: N/A
Past year issue authors: 0
Past year pull request authors: 0
Past year average comments per issue: 0
Past year average comments per pull request: 0
Past year merged pull request: 0
Past year bot issues: 0
Past year bot pull requests: 0
Top Issue Authors
- smazrouee (1)
- roryk (1)
Top Pull Request Authors
- roryk (1)
Top Issue Labels
Top Pull Request Labels
Dependencies
- grid * depends
- MASS * imports
- ggplot2 * imports
- gridBase * imports
- miniUI * imports
- seriation * imports
- shiny * imports
- DESeq2 * suggests
- NBPSeq * suggests
- biomaRt * suggests
- edgeR * suggests
- limma * suggests