tacmagic

mri neuroimaging neuroscience neuroscience-methods pet pet-mr positron positron-emission-tomography r statistics

Score: 8.58185670474196

Last synced: about 20 hours ago
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Repository metadata:

tacmagic: PET Analysis in R

Host: GitHub
URL: https://github.com/ropensci/tacmagic
Owner: ropensci
License: gpl-3.0
Created: 2018-04-28T16:53:02.000Z (about 8 years ago)
Default Branch: master
Last Pushed: 2023-08-21T01:08:38.000Z (almost 3 years ago)
Last Synced: 2026-03-24T11:12:01.947Z (3 months ago)
Topics: mri, neuroimaging, neuroscience, neuroscience-methods, pet, pet-mr, positron, positron-emission-tomography, r, statistics
Language: R
Homepage: https://docs.ropensci.org/tacmagic
Size: 1.79 MB
Stars: 6
Watchers: 4
Forks: 1
Open Issues: 1
Metadata Files:
- Readme: README.md
- Changelog: NEWS.md
- Contributing: contributing.md
- License: LICENSE
- Codemeta: codemeta.json

CodeMeta metadata:

@context:
- https://doi.org/10.5063/schema/codemeta-2.0
- http://schema.org
@type: SoftwareSourceCode
Identifier: tacmagic
Description: To facilitate the analysis of positron emission tomography (PET) time activity curve (TAC) data, and to encourage open science and replicability, this package supports data loading and analysis of multiple TAC file formats. Functions are available to analyze loaded TAC data for individual participants or in batches. Major functionality includes weighted TAC merging by region of interest (ROI), calculating models including standardized uptake value ratio (SUVR) and distribution volume ratio (DVR, Logan et al. 1996 ), basic plotting functions and calculation of cut-off values (Aizenstein et al. 2008 ). Please see the walkthrough vignette for a detailed overview of 'tacmagic' functions.
Name: tacmagic: Positron Emission Tomography Time-Activity Curve Analysis
Code repository: https://github.com/ropensci/tacmagic
Issue tracker: https://github.com/ropensci/tacmagic
License: https://spdx.org/licenses/GPL-3.0
Version: 0.3.0
Programming language:
- @type: ComputerLanguage
- Name: R
- Version: 3.6.0
- Url: https://r-project.org
Runtime platform: R version 3.6.0 (2019-04-26)
Author:
- - @type: Person
  - Given name: Eric
  - Family name: Brown
  - Email: eb@ericebrown.com
  - @id: https://orcid.org/0000-0002-1575-2606
Maintainer:
- - @type: Person
  - Given name: Eric
  - Family name: Brown
  - Email: eb@ericebrown.com
  - @id: https://orcid.org/0000-0002-1575-2606
Software suggestions:
- - @type: SoftwareApplication
  - Identifier: testthat
  - Name: testthat
  - Provider:
    - @id: https://cran.r-project.org
    - @type: Organization
    - Name: Comprehensive R Archive Network (CRAN)
    - Url: https://cran.r-project.org
  - Same as: https://CRAN.R-project.org/package=testthat
- - @type: SoftwareApplication
  - Identifier: knitr
  - Name: knitr
  - Provider:
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    - @type: Organization
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    - @type: Organization
    - Name: Comprehensive R Archive Network (CRAN)
    - Url: https://cran.r-project.org
  - Same as: https://CRAN.R-project.org/package=rmarkdown
- - @type: SoftwareApplication
  - Identifier: covr
  - Name: covr
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    - Url: https://cran.r-project.org
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    - @type: Organization
    - Name: Comprehensive R Archive Network (CRAN)
    - Url: https://cran.r-project.org
  - Same as: https://CRAN.R-project.org/package=vdiffr
Software requirements:
- - @type: SoftwareApplication
  - Identifier: R
  - Name: R
  - Version: >= 3.4
- - @type: SoftwareApplication
  - Identifier: graphics
  - Name: graphics
- - @type: SoftwareApplication
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  - Same as: https://CRAN.R-project.org/package=pracma
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- - @type: SoftwareApplication
  - Identifier: R.matlab
  - Name: R.matlab
  - Provider:
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    - @type: Organization
    - Name: Comprehensive R Archive Network (CRAN)
    - Url: https://cran.r-project.org
  - Same as: https://CRAN.R-project.org/package=R.matlab
Readme: https://github.com/ropensci/tacmagic/blob/master/readme.md
Cont integration:
- https://travis-ci.org/ropensci/tacmagic
- https://codecov.io/github/ropensci/tacmagic?branch=master
Keywords:
- positron-emission-tomography
- pet
- pet-mr
- neuroimaging
- r
- statistics
- positron
- mri
- neuroscience
- neuroscience-methods
Release notes: https://github.com/ropensci/tacmagic/blob/master/NEWS.md
Provider:
- @id: https://cran.r-project.org
- @type: Organization
- Name: Comprehensive R Archive Network (CRAN)
- Url: https://cran.r-project.org
Contributor:
Copyright holder:
Funder:

Owner metadata:

Name: rOpenSci
Login: ropensci
Email: info@ropensci.org
Kind: organization
Description:
Website: https://ropensci.org/
Location: Berkeley, CA
Twitter: rOpenSci
Company:
Icon url: https://avatars.githubusercontent.com/u/1200269?v=4
Repositories: 307
Last Synced at: 2023-03-10T20:30:59.242Z
Profile URL: https://github.com/ropensci

GitHub Events

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Watch event: 1
Total: 1

Last Year

Watch event: 1
Total: 1

Committers metadata

Last synced: 8 months ago

Total Commits: 245
Total Committers: 3
Avg Commits per committer: 81.667
Development Distribution Score (DDS): 0.012

Commits in past year: 0
Committers in past year: 0
Avg Commits per committer in past year: 0.0
Development Distribution Score (DDS) in past year: 0.0

Name	Email	Commits
eebrown	e**b@e**m	242
Jeroen Ooms	j**s@g**m	2
rOpenSci Bot	m**t@g**m	1

Issue and Pull Request metadata

Last synced: 10 months ago

Total issues: 4
Total pull requests: 15
Average time to close issues: 18 days
Average time to close pull requests: 8 minutes
Total issue authors: 2
Total pull request authors: 1
Average comments per issue: 1.0
Average comments per pull request: 0.07
Merged pull request: 13
Bot issues: 0
Bot pull requests: 0

Past year issues: 0
Past year pull requests: 0
Past year average time to close issues: N/A
Past year average time to close pull requests: N/A
Past year issue authors: 0
Past year pull request authors: 0
Past year average comments per issue: 0
Past year average comments per pull request: 0
Past year merged pull request: 0
Past year bot issues: 0
Past year bot pull requests: 0

More stats: https://issues.ecosyste.ms/repositories/lookup?url=https://github.com/ropensci/tacmagic

Top Issue Authors

eebrown (3)
mpadge (1)

Top Pull Request Authors

eebrown (15)

Top Issue Labels

enhancement (1)

Top Pull Request Labels

Package metadata

Total packages: 1
Total downloads:
- cran: 253 last-month
Total dependent packages: 0
Total dependent repositories: 0
Total versions: 3
Total maintainers: 1

cran.r-project.org: tacmagic

Positron Emission Tomography Time-Activity Curve Analysis

Homepage: https://github.com/ropensci/tacmagic
Documentation: http://cran.r-project.org/web/packages/tacmagic/tacmagic.pdf
Licenses: GPL-3
Latest release: 0.3.1 (published over 5 years ago)
Last Synced: 2025-10-30T03:58:08.378Z (8 months ago)
Versions: 3
Dependent Packages: 0
Dependent Repositories: 0
Downloads: 253 Last month
Rankings:
- Forks count: 21.888%
- Stargazers count: 26.172%
- Dependent packages count: 29.797%
- Dependent repos count: 35.455%
- Average: 36.545%
- Downloads: 69.412%
Maintainers (1)
- eb@ericebrown.com

Dependencies

DESCRIPTION cran

R >= 3.4 depends
R.matlab * imports
grDevices * imports
graphics * imports
pracma * imports
utils * imports
covr * suggests
knitr * suggests
rmarkdown * suggests
testthat * suggests
vdiffr * suggests

ecosyste.ms

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Summary