JOSS: https://github.com/ropensci/UCSCXenaTools
api-client bioinformatics ccle downloader icgc r tcga toil treehouse ucsc ucsc-xena
Score: 13.85478896176111
Last synced: about 22 hours ago
JSON representation
Repository metadata:
:package: An R package for accessing genomics data from UCSC Xena platform, from cancer multi-omics to single-cell RNA-seq https://cran.r-project.org/web/packages/UCSCXenaTools/
- Host: GitHub
- URL: https://github.com/ropensci/UCSCXenaTools
- Owner: ropensci
- License: gpl-3.0
- Created: 2019-03-31T08:39:37.000Z (over 7 years ago)
- Default Branch: master
- Last Pushed: 2026-05-05T10:34:46.000Z (3 months ago)
- Last Synced: 2026-07-28T18:05:16.604Z (17 days ago)
- Topics: api-client, bioinformatics, ccle, downloader, icgc, r, tcga, toil, treehouse, ucsc, ucsc-xena
- Language: R
- Homepage: https://docs.ropensci.org/UCSCXenaTools
- Size: 3.03 MB
- Stars: 118
- Watchers: 3
- Forks: 14
- Open Issues: 1
-
Metadata Files:
- Readme: README.Rmd
- Changelog: NEWS.md
- License: LICENSE.md
Owner metadata:
- Name: rOpenSci
- Login: ropensci
- Email: info@ropensci.org
- Kind: organization
- Description:
- Website: https://ropensci.org/
- Location: Berkeley, CA
- Twitter: rOpenSci
- Company:
- Icon url: https://avatars.githubusercontent.com/u/1200269?v=4
- Repositories: 307
- Last Synced at: 2023-03-10T20:30:59.242Z
- Profile URL: https://github.com/ropensci
GitHub Events
Total
- Create event: 1
- Fork event: 2
- Issue comment event: 23
- Issues event: 14
- Push event: 11
- Release event: 1
- Watch event: 12
- Total: 64
Last Year
- Fork event: 1
- Issue comment event: 4
- Issues event: 6
- Push event: 5
- Watch event: 4
- Total: 20
Committers metadata
Last synced: 2 days ago
Total Commits: 279
Total Committers: 4
Avg Commits per committer: 69.75
Development Distribution Score (DDS): 0.022
Commits in past year: 13
Committers in past year: 1
Avg Commits per committer in past year: 13.0
Development Distribution Score (DDS) in past year: 0.0
| Name | Commits | |
|---|---|---|
| ShixiangWang | w****x@s****n | 273 |
| Martin Morgan | m****n@f****g | 3 |
| Shixiang Wang (王诗翔) | w****g@i****m | 2 |
| rOpenSci Bot | m****t@g****m | 1 |
Issue and Pull Request metadata
Last synced: 6 months ago
Total issues: 52
Total pull requests: 0
Average time to close issues: about 1 month
Average time to close pull requests: N/A
Total issue authors: 18
Total pull request authors: 0
Average comments per issue: 1.73
Average comments per pull request: 0
Merged pull request: 0
Bot issues: 0
Bot pull requests: 0
Past year issues: 8
Past year pull requests: 0
Past year average time to close issues: 17 days
Past year average time to close pull requests: N/A
Past year issue authors: 5
Past year pull request authors: 0
Past year average comments per issue: 1.5
Past year average comments per pull request: 0
Past year merged pull request: 0
Past year bot issues: 0
Past year bot pull requests: 0
Top Issue Authors
- ShixiangWang (34)
- maelle (2)
- ayueme (1)
- markgene (1)
- gbregni (1)
- danshu (1)
- vuzun (1)
- Amhaslam (1)
- PanSX-Dr (1)
- ghost (1)
- adomingues (1)
- sckott (1)
- jianguozhouzunyimedicaluniversity (1)
- Shiywa (1)
- jbagnot (1)
Top Pull Request Authors
Top Issue Labels
- enhancement (10)
- bug (7)
- more-info-needed (6)
- help wanted (4)
- data-source-update (3)
- good first issue (2)
- plan (2)
- invalid (1)
- question (1)
Top Pull Request Labels
Package metadata
- Total packages: 3
-
Total downloads:
- cran: 1,650 last-month
- Total docker downloads: 524
- Total dependent packages: 2 (may contain duplicates)
- Total dependent repositories: 6 (may contain duplicates)
- Total versions: 85
- Total maintainers: 1
proxy.golang.org: github.com/ropensci/UCSCXenaTools
- Homepage:
- Documentation: https://pkg.go.dev/github.com/ropensci/UCSCXenaTools#section-documentation
- Licenses: gpl-3.0
- Latest release: v1.7.0 (published 6 months ago)
- Last Synced: 2026-08-13T03:11:40.568Z (2 days ago)
- Versions: 24
- Dependent Packages: 0
- Dependent Repositories: 0
-
Rankings:
- Dependent packages count: 4.765%
- Average: 4.926%
- Dependent repos count: 5.086%
proxy.golang.org: github.com/ropensci/ucscxenatools
- Homepage:
- Documentation: https://pkg.go.dev/github.com/ropensci/ucscxenatools#section-documentation
- Licenses: gpl-3.0
- Latest release: v1.7.0 (published 6 months ago)
- Last Synced: 2026-08-13T03:15:32.369Z (2 days ago)
- Versions: 24
- Dependent Packages: 0
- Dependent Repositories: 0
-
Rankings:
- Dependent packages count: 4.827%
- Average: 4.99%
- Dependent repos count: 5.152%
cran.r-project.org: UCSCXenaTools
Download and Explore Datasets from UCSC Xena Data Hubs
- Homepage: https://docs.ropensci.org/UCSCXenaTools/
- Documentation: http://cran.r-project.org/web/packages/UCSCXenaTools/UCSCXenaTools.pdf
- Licenses: GPL-3
- Latest release: 1.7.0 (published 6 months ago)
- Last Synced: 2026-08-13T03:03:56.451Z (2 days ago)
- Versions: 37
- Dependent Packages: 2
- Dependent Repositories: 6
- Downloads: 1,650 Last month
- Docker Downloads: 524
-
Rankings:
- Stargazers count: 4.102%
- Forks count: 5.8%
- Average: 11.423%
- Dependent repos count: 11.892%
- Dependent packages count: 13.638%
- Docker downloads count: 16.478%
- Downloads: 16.629%
- Maintainers (1)