JOSS: https://github.com/bids-standard/pybids
api bids python
Score: 22.189572159574873
Last synced: about 6 hours ago
JSON representation
Repository metadata:
Python tools for querying and manipulating BIDS datasets.
- Host: GitHub
- URL: https://github.com/bids-standard/pybids
- Owner: bids-standard
- License: mit
- Created: 2016-07-09T15:08:27.000Z (about 10 years ago)
- Default Branch: main
- Last Pushed: 2026-08-04T20:13:03.000Z (9 days ago)
- Last Synced: 2026-08-06T23:39:31.358Z (6 days ago)
- Topics: api, bids, python
- Language: Python
- Homepage: https://bids-standard.github.io/pybids/
- Size: 14.3 MB
- Stars: 262
- Watchers: 20
- Forks: 135
- Open Issues: 124
-
Metadata Files:
- Readme: README.md
- Changelog: CHANGELOG.rst
- Contributing: CONTRIBUTING.md
- License: LICENSE
- Zenodo: .zenodo.json
Owner metadata:
- Name: Brain Imaging Data Structure
- Login: bids-standard
- Email:
- Kind: organization
- Description:
- Website: https://bids.neuroimaging.io
- Location:
- Twitter: BIDSStandard
- Company:
- Icon url: https://avatars.githubusercontent.com/u/43044189?v=4
- Repositories: 47
- Last Synced at: 2024-03-27T04:27:58.403Z
- Profile URL: https://github.com/bids-standard
GitHub Events
Total
- Create event: 48
- Delete event: 47
- Fork event: 5
- Issue comment event: 96
- Issues event: 32
- Pull request event: 117
- Pull request review comment event: 9
- Pull request review event: 21
- Push event: 96
- Release event: 3
- Watch event: 24
- Total: 498
Last Year
- Create event: 26
- Delete event: 32
- Issue comment event: 21
- Issues event: 5
- Pull request event: 61
- Pull request review comment event: 4
- Pull request review event: 9
- Push event: 67
- Watch event: 3
- Total: 228
Committers metadata
Last synced: 1 day ago
Total Commits: 2,581
Total Committers: 77
Avg Commits per committer: 33.519
Development Distribution Score (DDS): 0.722
Commits in past year: 100
Committers in past year: 8
Avg Commits per committer in past year: 12.5
Development Distribution Score (DDS) in past year: 0.52
| Name | Commits | |
|---|---|---|
| Tal Yarkoni | t****i@g****m | 717 |
| Christopher J. Markiewicz | m****z@s****u | 608 |
| Alejandro de la Vega | d****a@u****u | 381 |
| dependabot[bot] | 4****] | 98 |
| Krzysztof J. Gorgolewski | k****i@g****m | 77 |
| Taylor Salo | s****t@p****u | 72 |
| Ariel Rokem | a****m@g****m | 64 |
| Remi Gau | r****u@h****m | 59 |
| Yaroslav O. Halchenko | d****n@o****m | 49 |
| Dimitri Papadopoulos Orfanos | 3****s | 37 |
| Oscar Esteban | c****e@o****s | 36 |
| James D. Kent | j****t@u****u | 29 |
| Hans Johnson | h****n@g****m | 28 |
| Krista DeStasio | k****o@g****m | 27 |
| Evgenii Kalenkovich | e****h@g****m | 24 |
| Dmitry Petrov | t****v@g****m | 17 |
| Dylan M. Nielson | D****n@n****v | 16 |
| Stefan Appelhoff | s****f@m****g | 15 |
| Mathias Goncalves | m****g@s****u | 15 |
| Peter Van Dyken | p****2@u****a | 14 |
| Shashank Bansal | s****6@g****m | 11 |
| Ashley Stewart | a****u@g****m | 9 |
| Jake VanderPlas | j****p@u****u | 8 |
| Gregory Kiar | g****r@m****a | 8 |
| Johan Carlin | j****n@g****m | 8 |
| Satrajit Ghosh | s****a@m****u | 8 |
| Kirstie Whitaker | k****1@c****k | 7 |
| Elizabeth DuPre | e****2@c****u | 7 |
| Adina Wagner | a****r@t****e | 7 |
| Ali Khan | a****k@r****a | 6 |
| and 47 more... | ||
Issue and Pull Request metadata
Last synced: 2 days ago
Total issues: 86
Total pull requests: 331
Average time to close issues: 10 months
Average time to close pull requests: 29 days
Total issue authors: 55
Total pull request authors: 31
Average comments per issue: 2.73
Average comments per pull request: 1.87
Merged pull request: 218
Bot issues: 2
Bot pull requests: 156
Past year issues: 11
Past year pull requests: 70
Past year average time to close issues: 1 day
Past year average time to close pull requests: 16 days
Past year issue authors: 9
Past year pull request authors: 13
Past year average comments per issue: 0.27
Past year average comments per pull request: 0.63
Past year merged pull request: 18
Past year bot issues: 0
Past year bot pull requests: 48
Top Issue Authors
- effigies (7)
- adelavega (6)
- pvandyken (5)
- bpinsard (5)
- tsalo (4)
- oesteban (3)
- alperkent (2)
- yarikoptic (2)
- dependabot[bot] (2)
- mcsitter (2)
- MRIDude (2)
- cookpa (2)
- anushkagupta200615-jpg (2)
- psadil (1)
- kaare-mikkelsen (1)
Top Pull Request Authors
- dependabot[bot] (147)
- effigies (61)
- Remi-Gau (23)
- DimitriPapadopoulos (18)
- adelavega (15)
- github-actions[bot] (9)
- akhanf (6)
- bpinsard (5)
- tsalo (4)
- oesteban (4)
- jmumford (4)
- bendhouseart (4)
- cookpa (4)
- astewartau (3)
- alperkent (3)
Top Issue Labels
- bug (12)
- layout (6)
- github_actions (2)
- dependencies (2)
- wontfix (2)
- enhancement (1)
- good for beginners (1)
- question (1)
- discussion (1)
- help wanted (1)
- documentation (1)
- duplicate (1)
- statsmodels (1)
Top Pull Request Labels
- dependencies (147)
- submodules (71)
- python:uv (51)
- github_actions (21)
- python (4)
- enhancement (2)
- windows (1)
Package metadata
- Total packages: 12
-
Total downloads:
- pypi: 117,111 last-month
- Total docker downloads: 28,429
- Total dependent packages: 51 (may contain duplicates)
- Total dependent repositories: 163 (may contain duplicates)
- Total versions: 79
- Total maintainers: 6
pypi.org: pybids
bids: interface with datasets conforming to BIDS
- Homepage: https://github.com/bids-standard/pybids
- Documentation: https://pybids.readthedocs.io/
- Licenses: MIT License
- Latest release: 0.22.0 (published 5 months ago)
- Last Synced: 2026-08-12T02:01:38.686Z (1 day ago)
- Versions: 58
- Dependent Packages: 46
- Dependent Repositories: 163
- Downloads: 117,111 Last month
- Docker Downloads: 28,429
-
Rankings:
- Dependent packages count: 0.339%
- Dependent repos count: 1.191%
- Docker downloads count: 1.216%
- Downloads: 1.935%
- Average: 2.337%
- Forks count: 4.392%
- Stargazers count: 4.951%
- Maintainers (3)
spack.io: py-pybids
bids: interface with datasets conforming to BIDS
- Homepage: https://github.com/bids-standard/pybids
- Licenses: []
- Latest release: 0.22.0 (published 3 months ago)
- Last Synced: 2026-08-12T02:01:45.665Z (1 day ago)
- Versions: 11
- Dependent Packages: 5
- Dependent Repositories: 0
-
Rankings:
- Dependent repos count: 0.0%
- Average: 8.649%
- Dependent packages count: 9.712%
- Forks count: 10.171%
- Stargazers count: 14.714%
- Maintainers (1)
nixpkgs-23.05: python310Packages.pybids
Python tools for querying and manipulating BIDS datasets
- Homepage: https://github.com/bids-standard/pybids
- Documentation: https://github.com/NixOS/nixpkgs/blob/nixos-23.05/pkgs/development/python-modules/pybids/default.nix#L63
- Licenses: MIT
- Latest release: 0.15.6 (published 7 months ago)
- Last Synced: 2026-04-18T07:04:52.398Z (4 months ago)
- Versions: 1
- Dependent Packages: 0
- Dependent Repositories: 0
-
Rankings:
- Dependent repos count: 0.0%
- Dependent packages count: 0.0%
- Average: 100%
- Maintainers (1)
nixpkgs-24.05: python312Packages.pybids
Python tools for querying and manipulating BIDS datasets
- Homepage: https://github.com/bids-standard/pybids
- Documentation: https://github.com/NixOS/nixpkgs/blob/nixos-24.05/pkgs/development/python-modules/pybids/default.nix#L70
- Licenses: MIT
- Latest release: 0.16.4 (published 6 months ago)
- Last Synced: 2026-03-07T13:06:37.776Z (5 months ago)
- Versions: 1
- Dependent Packages: 0
- Dependent Repositories: 0
-
Rankings:
- Dependent repos count: 0.0%
- Dependent packages count: 0.0%
- Average: 100%
nixpkgs-24.11: python311Packages.pybids
Python tools for querying and manipulating BIDS datasets
- Homepage: https://github.com/bids-standard/pybids
- Documentation: https://github.com/NixOS/nixpkgs/blob/nixos-24.11/pkgs/development/python-modules/pybids/default.nix#L70
- Licenses: MIT
- Latest release: 0.17.2 (published 6 months ago)
- Last Synced: 2026-07-28T14:02:28.468Z (16 days ago)
- Versions: 1
- Dependent Packages: 0
- Dependent Repositories: 0
-
Rankings:
- Dependent repos count: 0.0%
- Dependent packages count: 0.0%
- Average: 100%
- Maintainers (1)
nixpkgs-23.11: python310Packages.pybids
Python tools for querying and manipulating BIDS datasets
- Homepage: https://github.com/bids-standard/pybids
- Documentation: https://github.com/NixOS/nixpkgs/blob/nixos-23.11/pkgs/development/python-modules/pybids/default.nix#L58
- Licenses: MIT
- Latest release: 0.16.3 (published 6 months ago)
- Last Synced: 2026-04-10T23:01:22.353Z (4 months ago)
- Versions: 1
- Dependent Packages: 0
- Dependent Repositories: 0
-
Rankings:
- Dependent repos count: 0.0%
- Dependent packages count: 0.0%
- Average: 100%
- Maintainers (1)
nixpkgs-24.11: python312Packages.pybids
Python tools for querying and manipulating BIDS datasets
- Homepage: https://github.com/bids-standard/pybids
- Documentation: https://github.com/NixOS/nixpkgs/blob/nixos-24.11/pkgs/development/python-modules/pybids/default.nix#L70
- Licenses: MIT
- Latest release: 0.17.2 (published 6 months ago)
- Last Synced: 2026-03-06T08:30:08.675Z (5 months ago)
- Versions: 1
- Dependent Packages: 0
- Dependent Repositories: 0
-
Rankings:
- Maintainers (1)
nixpkgs-23.05: python311Packages.pybids
Python tools for querying and manipulating BIDS datasets
- Homepage: https://github.com/bids-standard/pybids
- Documentation: https://github.com/NixOS/nixpkgs/blob/nixos-23.05/pkgs/development/python-modules/pybids/default.nix#L63
- Licenses: MIT
- Latest release: 0.15.6 (published 7 months ago)
- Last Synced: 2026-04-14T13:02:59.807Z (4 months ago)
- Versions: 1
- Dependent Packages: 0
- Dependent Repositories: 0
-
Rankings:
- Dependent repos count: 0.0%
- Dependent packages count: 0.0%
- Average: 100%
- Maintainers (1)
nixpkgs-unstable: python313Packages.pybids
Python tools for querying and manipulating BIDS datasets
- Homepage: https://github.com/bids-standard/pybids
- Documentation: https://github.com/NixOS/nixpkgs/blob/nixos-unstable/pkgs/development/python-modules/pybids/default.nix#L78
- Licenses: MIT
- Latest release: 0.21.0 (published 7 months ago)
- Last Synced: 2026-04-03T10:08:42.085Z (4 months ago)
- Versions: 1
- Dependent Packages: 0
- Dependent Repositories: 0
-
Rankings:
- Dependent repos count: 0.0%
- Dependent packages count: 0.0%
- Average: 100%
- Maintainers (1)
nixpkgs-unstable: python314Packages.pybids
Python tools for querying and manipulating BIDS datasets
- Homepage: https://github.com/bids-standard/pybids
- Documentation: https://github.com/NixOS/nixpkgs/blob/nixos-unstable/pkgs/development/python-modules/pybids/default.nix#L78
- Licenses: MIT
- Latest release: 0.21.0 (published 7 months ago)
- Last Synced: 2026-03-08T04:43:54.420Z (5 months ago)
- Versions: 1
- Dependent Packages: 0
- Dependent Repositories: 0
-
Rankings:
- Dependent repos count: 0.0%
- Dependent packages count: 0.0%
- Average: 100%
- Maintainers (1)
nixpkgs-24.05: python311Packages.pybids
Python tools for querying and manipulating BIDS datasets
- Homepage: https://github.com/bids-standard/pybids
- Documentation: https://github.com/NixOS/nixpkgs/blob/nixos-24.05/pkgs/development/python-modules/pybids/default.nix#L70
- Licenses: MIT
- Latest release: 0.16.4 (published 6 months ago)
- Last Synced: 2026-07-25T21:01:28.635Z (18 days ago)
- Versions: 1
- Dependent Packages: 0
- Dependent Repositories: 0
-
Rankings:
- Dependent repos count: 0.0%
- Dependent packages count: 0.0%
- Average: 100%
nixpkgs-23.11: python311Packages.pybids
Python tools for querying and manipulating BIDS datasets
- Homepage: https://github.com/bids-standard/pybids
- Documentation: https://github.com/NixOS/nixpkgs/blob/nixos-23.11/pkgs/development/python-modules/pybids/default.nix#L58
- Licenses: MIT
- Latest release: 0.16.3 (published 6 months ago)
- Last Synced: 2026-04-12T15:01:51.789Z (4 months ago)
- Versions: 1
- Dependent Packages: 0
- Dependent Repositories: 0
-
Rankings:
- Dependent repos count: 0.0%
- Dependent packages count: 0.0%
- Average: 100%
- Maintainers (1)
Dependencies
- actions/checkout v3 composite
- codespell-project/actions-codespell master composite
- actions/checkout v3 composite
- actions/setup-python v4 composite
- actions/upload-artifact v3 composite
- peaceiris/actions-gh-pages v3 composite
- bids-validator *
- click >=8.0
- formulaic >=0.2.4, <0.6
- nibabel >=2.1
- num2words *
- numpy <1.25.0.dev0; python_version < '3.9'
- numpy *
- pandas >=0.23
- scipy *
- sqlalchemy <1.4.0.dev0
- actions/checkout v4 composite
- actions/download-artifact v4 composite
- actions/setup-python v5 composite
- astral-sh/setup-uv v5 composite
- codecov/codecov-action v5 composite
- hynek/build-and-inspect-python-package v2 composite
- pypa/gh-action-pypi-publish release/v1 composite
- actions/checkout v6 composite
- astral-sh/setup-uv v7 composite
- codecov/codecov-action v6 composite
- 150 dependencies