JOSS: https://github.com/bids-standard/pybids
api bids python
Score: 22.459849936801483
Last synced: about 5 hours ago
JSON representation
Repository metadata:
Python tools for querying and manipulating BIDS datasets.
- Host: GitHub
- URL: https://github.com/bids-standard/pybids
- Owner: bids-standard
- License: mit
- Created: 2016-07-09T15:08:27.000Z (over 9 years ago)
- Default Branch: main
- Last Pushed: 2026-01-26T14:53:24.000Z (12 days ago)
- Last Synced: 2026-01-31T18:54:00.735Z (7 days ago)
- Topics: api, bids, python
- Language: Python
- Homepage: https://bids-standard.github.io/pybids/
- Size: 11.9 MB
- Stars: 253
- Watchers: 19
- Forks: 130
- Open Issues: 104
-
Metadata Files:
- Readme: README.md
- Changelog: CHANGELOG.rst
- License: LICENSE
- Zenodo: .zenodo.json
Owner metadata:
- Name: Brain Imaging Data Structure
- Login: bids-standard
- Email:
- Kind: organization
- Description:
- Website: https://bids.neuroimaging.io
- Location:
- Twitter: BIDSStandard
- Company:
- Icon url: https://avatars.githubusercontent.com/u/43044189?v=4
- Repositories: 47
- Last Synced at: 2024-03-27T04:27:58.403Z
- Profile URL: https://github.com/bids-standard
GitHub Events
Total
- Create event: 40
- Delete event: 34
- Fork event: 5
- Issue comment event: 91
- Issues event: 32
- Pull request event: 107
- Pull request review comment event: 5
- Pull request review event: 17
- Push event: 60
- Release event: 3
- Watch event: 24
- Total: 418
Last Year
- Create event: 30
- Delete event: 25
- Fork event: 3
- Issue comment event: 38
- Issues event: 19
- Pull request event: 79
- Pull request review comment event: 4
- Pull request review event: 13
- Push event: 46
- Release event: 1
- Watch event: 14
- Total: 272
Committers metadata
Last synced: about 2 months ago
Total Commits: 2,527
Total Committers: 74
Avg Commits per committer: 34.149
Development Distribution Score (DDS): 0.716
Commits in past year: 104
Committers in past year: 9
Avg Commits per committer in past year: 11.556
Development Distribution Score (DDS) in past year: 0.452
| Name | Commits | |
|---|---|---|
| Tal Yarkoni | t****i@g****m | 717 |
| Christopher J. Markiewicz | m****z@s****u | 597 |
| Alejandro de la Vega | d****a@u****u | 381 |
| Krzysztof J. Gorgolewski | k****i@g****m | 77 |
| Taylor Salo | s****t@p****u | 72 |
| dependabot[bot] | 4****] | 69 |
| Ariel Rokem | a****m@g****m | 64 |
| Remi Gau | r****u@h****m | 59 |
| Yaroslav O. Halchenko | d****n@o****m | 49 |
| Dimitri Papadopoulos Orfanos | 3****s | 37 |
| Oscar Esteban | c****e@o****s | 36 |
| James D. Kent | j****t@u****u | 29 |
| Hans Johnson | h****n@g****m | 28 |
| Krista DeStasio | k****o@g****m | 27 |
| Evgenii Kalenkovich | e****h@g****m | 24 |
| Dmitry Petrov | t****v@g****m | 17 |
| Dylan M. Nielson | D****n@n****v | 16 |
| Stefan Appelhoff | s****f@m****g | 15 |
| Mathias Goncalves | m****g@s****u | 15 |
| Peter Van Dyken | p****2@u****a | 14 |
| Shashank Bansal | s****6@g****m | 11 |
| Jake VanderPlas | j****p@u****u | 8 |
| Gregory Kiar | g****r@m****a | 8 |
| Johan Carlin | j****n@g****m | 8 |
| Satrajit Ghosh | s****a@m****u | 8 |
| Kirstie Whitaker | k****1@c****k | 7 |
| Elizabeth DuPre | e****2@c****u | 7 |
| Adina Wagner | a****r@t****e | 7 |
| Ali Khan | a****k@r****a | 6 |
| Andrew Janke | a****w@a****t | 6 |
| and 44 more... | ||
Issue and Pull Request metadata
Last synced: 5 days ago
Total issues: 78
Total pull requests: 291
Average time to close issues: 11 months
Average time to close pull requests: about 1 month
Total issue authors: 51
Total pull request authors: 26
Average comments per issue: 2.9
Average comments per pull request: 2.01
Merged pull request: 203
Bot issues: 2
Bot pull requests: 129
Past year issues: 11
Past year pull requests: 81
Past year average time to close issues: 1 day
Past year average time to close pull requests: 13 days
Past year issue authors: 11
Past year pull request authors: 10
Past year average comments per issue: 0.27
Past year average comments per pull request: 0.58
Past year merged pull request: 41
Past year bot issues: 0
Past year bot pull requests: 50
Top Issue Authors
- effigies (6)
- adelavega (6)
- pvandyken (5)
- bpinsard (5)
- tsalo (4)
- oesteban (3)
- alperkent (2)
- dependabot[bot] (2)
- cookpa (2)
- MRIDude (2)
- psadil (1)
- kaare-mikkelsen (1)
- eulerleibniz (1)
- me-pic (1)
- Lestropie (1)
Top Pull Request Authors
- dependabot[bot] (120)
- effigies (60)
- Remi-Gau (22)
- DimitriPapadopoulos (17)
- adelavega (15)
- github-actions[bot] (9)
- akhanf (6)
- bpinsard (5)
- tsalo (4)
- oesteban (4)
- jmumford (4)
- cookpa (4)
- alperkent (3)
- coryshain (2)
- fraimondo (2)
Top Issue Labels
- bug (12)
- layout (5)
- wontfix (2)
- dependencies (2)
- github_actions (2)
- discussion (1)
- enhancement (1)
- statsmodels (1)
- duplicate (1)
- question (1)
- documentation (1)
Top Pull Request Labels
- dependencies (120)
- submodules (70)
- python:uv (30)
- github_actions (16)
- python (4)
- windows (1)
- enhancement (1)
Package metadata
- Total packages: 12
-
Total downloads:
- pypi: 186,248 last-month
- Total docker downloads: 28,429
- Total dependent packages: 51 (may contain duplicates)
- Total dependent repositories: 163 (may contain duplicates)
- Total versions: 77
- Total maintainers: 4
pypi.org: pybids
bids: interface with datasets conforming to BIDS
- Homepage: https://github.com/bids-standard/pybids
- Documentation: https://pybids.readthedocs.io/
- Licenses: The MIT License (MIT) Copyright (c) 2015-2016, Ariel Rokem, The University of Washington eScience Institute. Copyright (c) 2016--, PyBIDS developers, Planet Earth Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions: The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software. THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
- Latest release: 0.21.0 (published 4 months ago)
- Last Synced: 2026-01-01T12:05:27.343Z (about 1 month ago)
- Versions: 57
- Dependent Packages: 46
- Dependent Repositories: 163
- Downloads: 186,248 Last month
- Docker Downloads: 28,429
-
Rankings:
- Dependent packages count: 0.339%
- Dependent repos count: 1.191%
- Docker downloads count: 1.216%
- Downloads: 1.935%
- Average: 2.337%
- Forks count: 4.392%
- Stargazers count: 4.951%
- Maintainers (3)
spack.io: py-pybids
bids: interface with datasets conforming to BIDS
- Homepage: https://github.com/bids-standard/pybids
- Licenses: []
- Latest release: 0.20.0 (published 4 months ago)
- Last Synced: 2026-01-01T12:05:27.147Z (about 1 month ago)
- Versions: 10
- Dependent Packages: 5
- Dependent Repositories: 0
-
Rankings:
- Dependent repos count: 0.0%
- Average: 8.649%
- Dependent packages count: 9.712%
- Forks count: 10.171%
- Stargazers count: 14.714%
- Maintainers (1)
nixpkgs-23.11: python310Packages.pybids
Python tools for querying and manipulating BIDS datasets
- Homepage: https://github.com/bids-standard/pybids
- Documentation: https://github.com/NixOS/nixpkgs/blob/nixos-23.11/pkgs/development/python-modules/pybids/default.nix#L58
- Licenses: MIT
- Latest release: 0.16.3 (published 5 days ago)
- Last Synced: 2026-02-03T20:42:40.392Z (4 days ago)
- Versions: 1
- Dependent Packages: 0
- Dependent Repositories: 0
-
Rankings:
nixpkgs-23.11: python311Packages.pybids
Python tools for querying and manipulating BIDS datasets
- Homepage: https://github.com/bids-standard/pybids
- Documentation: https://github.com/NixOS/nixpkgs/blob/nixos-23.11/pkgs/development/python-modules/pybids/default.nix#L58
- Licenses: MIT
- Latest release: 0.16.3 (published 5 days ago)
- Last Synced: 2026-02-03T20:46:26.213Z (4 days ago)
- Versions: 1
- Dependent Packages: 0
- Dependent Repositories: 0
-
Rankings:
nixpkgs-unstable: python313Packages.pybids
Python tools for querying and manipulating BIDS datasets
- Homepage: https://github.com/bids-standard/pybids
- Documentation: https://github.com/NixOS/nixpkgs/blob/nixos-unstable/pkgs/development/python-modules/pybids/default.nix#L79
- Licenses: MIT
- Latest release: 0.21.0 (published 11 days ago)
- Last Synced: 2026-02-02T11:07:52.298Z (5 days ago)
- Versions: 1
- Dependent Packages: 0
- Dependent Repositories: 0
-
Rankings:
nixpkgs-23.05: python311Packages.pybids
Python tools for querying and manipulating BIDS datasets
- Homepage: https://github.com/bids-standard/pybids
- Documentation: https://github.com/NixOS/nixpkgs/blob/nixos-23.05/pkgs/development/python-modules/pybids/default.nix#L63
- Licenses: MIT
- Latest release: 0.15.6 (published 12 days ago)
- Last Synced: 2026-02-02T13:20:36.527Z (5 days ago)
- Versions: 1
- Dependent Packages: 0
- Dependent Repositories: 0
-
Rankings:
nixpkgs-23.05: python310Packages.pybids
Python tools for querying and manipulating BIDS datasets
- Homepage: https://github.com/bids-standard/pybids
- Documentation: https://github.com/NixOS/nixpkgs/blob/nixos-23.05/pkgs/development/python-modules/pybids/default.nix#L63
- Licenses: MIT
- Latest release: 0.15.6 (published 12 days ago)
- Last Synced: 2026-02-02T13:09:55.670Z (5 days ago)
- Versions: 1
- Dependent Packages: 0
- Dependent Repositories: 0
-
Rankings:
nixpkgs-24.11: python311Packages.pybids
Python tools for querying and manipulating BIDS datasets
- Homepage: https://github.com/bids-standard/pybids
- Documentation: https://github.com/NixOS/nixpkgs/blob/nixos-24.11/pkgs/development/python-modules/pybids/default.nix#L70
- Licenses: MIT
- Latest release: 0.17.2 (published 6 days ago)
- Last Synced: 2026-02-03T17:46:42.428Z (4 days ago)
- Versions: 1
- Dependent Packages: 0
- Dependent Repositories: 0
-
Rankings:
nixpkgs-24.11: python312Packages.pybids
Python tools for querying and manipulating BIDS datasets
- Homepage: https://github.com/bids-standard/pybids
- Documentation: https://github.com/NixOS/nixpkgs/blob/nixos-24.11/pkgs/development/python-modules/pybids/default.nix#L70
- Licenses: MIT
- Latest release: 0.17.2 (published 6 days ago)
- Last Synced: 2026-02-03T17:52:19.252Z (4 days ago)
- Versions: 1
- Dependent Packages: 0
- Dependent Repositories: 0
-
Rankings:
nixpkgs-unstable: python314Packages.pybids
Python tools for querying and manipulating BIDS datasets
- Homepage: https://github.com/bids-standard/pybids
- Documentation: https://github.com/NixOS/nixpkgs/blob/nixos-unstable/pkgs/development/python-modules/pybids/default.nix#L79
- Licenses: MIT
- Latest release: 0.21.0 (published 11 days ago)
- Last Synced: 2026-02-03T22:05:45.504Z (4 days ago)
- Versions: 1
- Dependent Packages: 0
- Dependent Repositories: 0
-
Rankings:
nixpkgs-24.05: python311Packages.pybids
Python tools for querying and manipulating BIDS datasets
- Homepage: https://github.com/bids-standard/pybids
- Documentation: https://github.com/NixOS/nixpkgs/blob/nixos-24.05/pkgs/development/python-modules/pybids/default.nix#L70
- Licenses: MIT
- Latest release: 0.16.4 (published 5 days ago)
- Last Synced: 2026-02-03T19:05:05.764Z (4 days ago)
- Versions: 1
- Dependent Packages: 0
- Dependent Repositories: 0
-
Rankings:
nixpkgs-24.05: python312Packages.pybids
Python tools for querying and manipulating BIDS datasets
- Homepage: https://github.com/bids-standard/pybids
- Documentation: https://github.com/NixOS/nixpkgs/blob/nixos-24.05/pkgs/development/python-modules/pybids/default.nix#L70
- Licenses: MIT
- Latest release: 0.16.4 (published 5 days ago)
- Last Synced: 2026-02-03T19:10:45.448Z (4 days ago)
- Versions: 1
- Dependent Packages: 0
- Dependent Repositories: 0
-
Rankings:
Dependencies
- actions/checkout v3 composite
- codespell-project/actions-codespell master composite
- actions/checkout v3 composite
- actions/setup-python v4 composite
- actions/upload-artifact v3 composite
- peaceiris/actions-gh-pages v3 composite
- bids-validator *
- click >=8.0
- formulaic >=0.2.4, <0.6
- nibabel >=2.1
- num2words *
- numpy <1.25.0.dev0; python_version < '3.9'
- numpy *
- pandas >=0.23
- scipy *
- sqlalchemy <1.4.0.dev0
- actions/checkout v4 composite
- actions/download-artifact v4 composite
- actions/setup-python v5 composite
- astral-sh/setup-uv v5 composite
- codecov/codecov-action v5 composite
- hynek/build-and-inspect-python-package v2 composite
- pypa/gh-action-pypi-publish release/v1 composite