pybids

api bids python

Score: 21.652384908685324

Last synced: about 12 hours ago
JSON representation

Repository metadata:

Python tools for querying and manipulating BIDS datasets.

Host: GitHub
URL: https://github.com/bids-standard/pybids
Owner: bids-standard
License: mit
Created: 2016-07-09T15:08:27.000Z (about 10 years ago)
Default Branch: main
Last Pushed: 2026-09-18T01:31:03.000Z (12 days ago)
Last Synced: 2026-09-20T05:10:49.233Z (10 days ago)
Topics: api, bids, python
Language: Python
Homepage: https://bids-standard.github.io/pybids/
Size: 13.6 MB
Stars: 268
Watchers: 20
Forks: 139
Open Issues: 128
Metadata Files:
- Readme: README.md
- Changelog: CHANGELOG.rst
- Contributing: CONTRIBUTING.md
- License: LICENSE
- Zenodo: .zenodo.json

Owner metadata:

Name: Brain Imaging Data Structure
Login: bids-standard
Email:
Kind: organization
Description:
Website: https://bids.neuroimaging.io
Location:
Twitter: BIDSStandard
Company:
Icon url: https://avatars.githubusercontent.com/u/43044189?v=4
Repositories: 57
Last Synced at: 2026-09-25T21:26:13.992Z
Profile URL: https://github.com/bids-standard

GitHub Events

Total

Create event: 48
Delete event: 47
Fork event: 6
Issue comment event: 96
Issues event: 32
Pull request event: 117
Pull request review comment event: 9
Pull request review event: 21
Push event: 96
Release event: 3
Watch event: 24
Total: 499

Last Year

Create event: 19
Delete event: 20
Fork event: 1
Issue comment event: 8
Issues event: 3
Pull request event: 42
Pull request review comment event: 4
Pull request review event: 5
Push event: 52
Watch event: 1
Total: 155

Committers metadata

Last synced: 1 day ago

Total Commits: 2,585
Total Committers: 80
Avg Commits per committer: 32.313
Development Distribution Score (DDS): 0.723

Commits in past year: 78
Committers in past year: 8
Avg Commits per committer in past year: 9.75
Development Distribution Score (DDS) in past year: 0.462

Name	Email	Commits
Tal Yarkoni	t**i@g**m	717
Christopher J. Markiewicz	m**z@s**u	608
Alejandro de la Vega	a**4@g**m	381
dependabot[bot]	4****]	99
Chris Gorgolewski	k**i@g**m	77
Taylor Salo	t**6@f**u	72
arokem	a**m@g**m	64
Remi Gau	r**u@h**m	59
Yaroslav Halchenko	d**n@o**m	49
Dimitri Papadopoulos	3****s	37
Oscar Esteban	c**e@o**s	36
James Kent	j**1@g**m	29
Hans Johnson	h**n@g**m	28
Krista DeStasio	k**o@g**m	27
kalenkovich	e**h@g**m	24
Dmitry Petrov	t**v@g**m	17
Stefan Appelhoff	s**f@m**g	15
mathiasg	m**g@s**u	15
Peter Van Dyken	p**2@u**a	14
Dylan Nielson	a**e@g**m	12
Shashank Bansal	s**6@g**m	11
Ashley Stewart	a**u@g**m	9
gkiar	g**7@g**m	8
Satrajit Ghosh	s**a@m**u	8
Jake VanderPlas	j**p@u**u	8
Johan Carlin	j**n@g**m	8
Adina Wagner	a**r@t**e	7
Elizabeth DuPre	e**2@c**u	7
Kirstie Whitaker	k**1@c**k	7
Ali Khan	a**k@r**a	6
and 50 more...

Issue and Pull Request metadata

Last synced: 1 day ago

Total issues: 509
Total pull requests: 847
Average time to close issues: 4 months
Average time to close pull requests: 22 days
Total issue authors: 136
Total pull request authors: 83
Average comments per issue: 3.86
Average comments per pull request: 3.1
Merged pull request: 684
Bot issues: 2
Bot pull requests: 198

Past year issues: 14
Past year pull requests: 88
Past year average time to close issues: about 1 month
Past year average time to close pull requests: 10 days
Past year issue authors: 11
Past year pull request authors: 14
Past year average comments per issue: 0.71
Past year average comments per pull request: 0.6
Past year merged pull request: 52
Past year bot issues: 0
Past year bot pull requests: 65

More stats: https://issues.ecosyste.ms/repositories/lookup?url=https://github.com/bids-standard/pybids

Top Issue Authors

adelavega (79)
tyarkoni (70)
effigies (64)
yarikoptic (37)
oesteban (14)
chrisgorgo (11)
bpinsard (11)
jdkent (10)
tsalo (9)
Remi-Gau (6)
pvandyken (6)
Shotgunosine (6)
shashankbansal6 (5)
mgxd (5)
adswa (5)

Top Pull Request Authors

effigies (209)
dependabot[bot] (182)
tyarkoni (77)
adelavega (74)
DimitriPapadopoulos (29)
Remi-Gau (27)
yarikoptic (22)
tsalo (17)
github-actions[bot] (16)
oesteban (15)
chrisgorgo (15)
hjmjohnson (8)
jdkent (7)
adswa (7)
Shotgunosine (6)

Top Issue Labels

bug (76)
enhancement (38)
statsmodels (20)
question (16)
documentation (14)
help wanted (10)
layout (9)
good for beginners (7)
variables (6)
wontfix (5)
reports (5)
transformations (4)
low priority (4)
github_actions (2)
dependencies (2)
duplicate (2)
discussion (1)
windows (1)

Top Pull Request Labels

dependencies (182)
submodules (80)
python:uv (72)
github_actions (25)
enhancement (10)
reports (5)
python (4)
prerelease (3)
statsmodels (2)
help wanted (1)
windows (1)

Package metadata

Total packages: 13
Total downloads:
- pypi: 51,253 last-month
Total docker downloads: 28,429
Total dependent packages: 51 (may contain duplicates)
Total dependent repositories: 163 (may contain duplicates)
Total versions: 80
Total maintainers: 6

pypi.org: pybids

bids: interface with datasets conforming to BIDS

Homepage: https://github.com/bids-standard/pybids
Documentation: https://pybids.readthedocs.io/
Licenses: MIT License
Latest release: 0.22.0 (published 7 months ago)
Last Synced: 2026-09-28T19:02:36.293Z (1 day ago)
Versions: 58
Dependent Packages: 46
Dependent Repositories: 163
Downloads: 51,253 Last month
Docker Downloads: 28,429
Rankings:
- Dependent packages count: 0.339%
- Dependent repos count: 1.191%
- Docker downloads count: 1.216%
- Downloads: 1.935%
- Average: 2.337%
- Forks count: 4.392%
- Stargazers count: 4.951%
Maintainers (3)
- cjmarkie
- filo
- tyarkoni

nixpkgs-24.11: python312Packages.pybids

Python tools for querying and manipulating BIDS datasets

Homepage: https://github.com/bids-standard/pybids
Documentation: https://github.com/NixOS/nixpkgs/blob/nixos-24.11/pkgs/development/python-modules/pybids/default.nix#L70
Licenses: MIT
Latest release: 0.17.2 (published 8 months ago)
Last Synced: 2026-09-20T06:27:49.139Z (10 days ago)
Versions: 1
Dependent Packages: 0
Dependent Repositories: 0
Rankings:
- Dependent repos count: 0.0%
- Dependent packages count: 0.0%
- Average: 3.656%
- Forks count: 5.19%
- Stargazers count: 9.434%
Maintainers (1)
- wegank

proxy.golang.org: github.com/bids-standard/pybids

Homepage:
Status: removed
Documentation: https://pkg.go.dev/github.com/bids-standard/pybids#section-documentation
Licenses: mit
Latest release: v0.0.0-20210820164444-8ee63bda6244 (published about 5 years ago)
Last Synced: 2026-09-28T19:02:36.902Z (1 day ago)
Versions: 1
Dependent Packages: 0
Dependent Repositories: 0
Rankings:
- Dependent packages count: 4.432%
- Average: 4.581%
- Dependent repos count: 4.73%

spack.io: py-pybids

bids: interface with datasets conforming to BIDS

Homepage: https://github.com/bids-standard/pybids
Licenses: []
Latest release: 0.22.0 (published 5 months ago)
Last Synced: 2026-09-28T19:02:36.680Z (1 day ago)
Versions: 11
Dependent Packages: 5
Dependent Repositories: 0
Rankings:
- Dependent repos count: 0.0%
- Average: 8.649%
- Dependent packages count: 9.712%
- Forks count: 10.171%
- Stargazers count: 14.714%
Maintainers (1)
- adamjstewart

nixpkgs-23.05: python310Packages.pybids

Python tools for querying and manipulating BIDS datasets

Homepage: https://github.com/bids-standard/pybids
Documentation: https://github.com/NixOS/nixpkgs/blob/nixos-23.05/pkgs/development/python-modules/pybids/default.nix#L63
Licenses: MIT
Latest release: 0.15.6 (published 8 months ago)
Last Synced: 2026-04-18T07:04:52.398Z (6 months ago)
Versions: 1
Dependent Packages: 0
Dependent Repositories: 0
Rankings:
- Dependent repos count: 0.0%
- Dependent packages count: 0.0%
- Average: 100%
Maintainers (1)
- jonringer

nixpkgs-24.11: python311Packages.pybids

Python tools for querying and manipulating BIDS datasets

Homepage: https://github.com/bids-standard/pybids
Documentation: https://github.com/NixOS/nixpkgs/blob/nixos-24.11/pkgs/development/python-modules/pybids/default.nix#L70
Licenses: MIT
Latest release: 0.17.2 (published 8 months ago)
Last Synced: 2026-09-27T14:26:18.685Z (3 days ago)
Versions: 1
Dependent Packages: 0
Dependent Repositories: 0
Rankings:
- Dependent repos count: 0.0%
- Dependent packages count: 0.0%
- Average: 100%
Maintainers (1)
- wegank

nixpkgs-unstable: python313Packages.pybids

Python tools for querying and manipulating BIDS datasets

Homepage: https://github.com/bids-standard/pybids
Documentation: https://github.com/NixOS/nixpkgs/blob/nixos-unstable/pkgs/development/python-modules/pybids/default.nix#L78
Licenses: MIT
Latest release: 0.21.0 (published 8 months ago)
Last Synced: 2026-04-03T10:08:42.085Z (6 months ago)
Versions: 1
Dependent Packages: 0
Dependent Repositories: 0
Rankings:
- Dependent repos count: 0.0%
- Dependent packages count: 0.0%
- Average: 100%
Maintainers (1)
- wegank

nixpkgs-24.05: python311Packages.pybids

Python tools for querying and manipulating BIDS datasets

Homepage: https://github.com/bids-standard/pybids
Documentation: https://github.com/NixOS/nixpkgs/blob/nixos-24.05/pkgs/development/python-modules/pybids/default.nix#L70
Licenses: MIT
Latest release: 0.16.4 (published 8 months ago)
Last Synced: 2026-07-25T21:01:28.635Z (2 months ago)
Versions: 1
Dependent Packages: 0
Dependent Repositories: 0
Rankings:
- Dependent repos count: 0.0%
- Dependent packages count: 0.0%
- Average: 100%

nixpkgs-unstable: python314Packages.pybids

Python tools for querying and manipulating BIDS datasets

Homepage: https://github.com/bids-standard/pybids
Documentation: https://github.com/NixOS/nixpkgs/blob/nixos-unstable/pkgs/development/python-modules/pybids/default.nix#L78
Licenses: MIT
Latest release: 0.21.0 (published 8 months ago)
Last Synced: 2026-03-08T04:43:54.420Z (7 months ago)
Versions: 1
Dependent Packages: 0
Dependent Repositories: 0
Rankings:
- Dependent repos count: 0.0%
- Dependent packages count: 0.0%
- Average: 100%
Maintainers (1)
- wegank

nixpkgs-23.05: python311Packages.pybids

Python tools for querying and manipulating BIDS datasets

Homepage: https://github.com/bids-standard/pybids
Documentation: https://github.com/NixOS/nixpkgs/blob/nixos-23.05/pkgs/development/python-modules/pybids/default.nix#L63
Licenses: MIT
Latest release: 0.15.6 (published 8 months ago)
Last Synced: 2026-04-14T13:02:59.807Z (6 months ago)
Versions: 1
Dependent Packages: 0
Dependent Repositories: 0
Rankings:
- Dependent repos count: 0.0%
- Dependent packages count: 0.0%
- Average: 100%
Maintainers (1)
- jonringer

nixpkgs-23.11: python310Packages.pybids

Python tools for querying and manipulating BIDS datasets

Homepage: https://github.com/bids-standard/pybids
Documentation: https://github.com/NixOS/nixpkgs/blob/nixos-23.11/pkgs/development/python-modules/pybids/default.nix#L58
Licenses: MIT
Latest release: 0.16.3 (published 8 months ago)
Last Synced: 2026-04-10T23:01:22.353Z (6 months ago)
Versions: 1
Dependent Packages: 0
Dependent Repositories: 0
Rankings:
- Dependent repos count: 0.0%
- Dependent packages count: 0.0%
- Average: 100%
Maintainers (1)
- jonringer

nixpkgs-23.11: python311Packages.pybids

Python tools for querying and manipulating BIDS datasets

Homepage: https://github.com/bids-standard/pybids
Documentation: https://github.com/NixOS/nixpkgs/blob/nixos-23.11/pkgs/development/python-modules/pybids/default.nix#L58
Licenses: MIT
Latest release: 0.16.3 (published 8 months ago)
Last Synced: 2026-04-12T15:01:51.789Z (6 months ago)
Versions: 1
Dependent Packages: 0
Dependent Repositories: 0
Rankings:
- Dependent repos count: 0.0%
- Dependent packages count: 0.0%
- Average: 100%
Maintainers (1)
- jonringer

nixpkgs-24.05: python312Packages.pybids

Python tools for querying and manipulating BIDS datasets

Homepage: https://github.com/bids-standard/pybids
Documentation: https://github.com/NixOS/nixpkgs/blob/nixos-24.05/pkgs/development/python-modules/pybids/default.nix#L70
Licenses: MIT
Latest release: 0.16.4 (published 8 months ago)
Last Synced: 2026-03-07T13:06:37.776Z (7 months ago)
Versions: 1
Dependent Packages: 0
Dependent Repositories: 0
Rankings:
- Dependent repos count: 0.0%
- Dependent packages count: 0.0%
- Average: 100%

Dependencies

.github/workflows/add-to-community-meeting-project.yml actions

actions/add-to-project v2.0.0 composite

.github/workflows/codespell.yml actions

actions/checkout v3 composite
codespell-project/actions-codespell master composite

.github/workflows/docs.yml actions

actions/checkout v3 composite
actions/setup-python v4 composite
actions/upload-artifact v3 composite
peaceiris/actions-gh-pages v3 composite

pyproject.toml pypi

bids-validator *
click >=8.0
formulaic >=0.2.4, <0.6
nibabel >=2.1
num2words *
numpy <1.25.0.dev0; python_version < '3.9'
numpy *
pandas >=0.23
scipy *
sqlalchemy <1.4.0.dev0

setup.py pypi

.github/workflows/build-test-deploy.yml actions

actions/checkout v4 composite
actions/download-artifact v4 composite
actions/setup-python v5 composite
astral-sh/setup-uv v5 composite
codecov/codecov-action v5 composite
hynek/build-and-inspect-python-package v2 composite
pypa/gh-action-pypi-publish release/v1 composite

.github/workflows/prerelease.yml actions

actions/checkout v6 composite
astral-sh/setup-uv v7 composite
codecov/codecov-action v6 composite

uv.lock pypi

150 dependencies

ecosyste.ms

Data

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Experiments

Summary

JOSS: https://github.com/bids-standard/pybids

Repository metadata:

Owner metadata:

GitHub Events

Total

Last Year

Committers metadata

Issue and Pull Request metadata

Top Issue Authors

Top Pull Request Authors

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Package metadata

pypi.org: pybids

nixpkgs-24.11: python312Packages.pybids

proxy.golang.org: github.com/bids-standard/pybids

spack.io: py-pybids

nixpkgs-23.05: python310Packages.pybids

nixpkgs-24.11: python311Packages.pybids

nixpkgs-unstable: python313Packages.pybids

nixpkgs-24.05: python311Packages.pybids

nixpkgs-unstable: python314Packages.pybids

nixpkgs-23.05: python311Packages.pybids

nixpkgs-23.11: python310Packages.pybids

nixpkgs-23.11: python311Packages.pybids

nixpkgs-24.05: python312Packages.pybids

Dependencies