lightr

file-import r r-package reproducibility reproducible-research reproducible-science spectral-data spectroscopy

Score: 13.860980932009031

Last synced: about 13 hours ago
JSON representation

Repository metadata:

Import spectral data and related metadata in R

Host: GitHub
URL: https://github.com/ropensci/lightr
Owner: ropensci
License: gpl-2.0
Created: 2018-11-08T11:59:31.000Z (over 7 years ago)
Default Branch: main
Last Pushed: 2026-05-01T11:04:21.000Z (about 2 months ago)
Last Synced: 2026-06-05T15:03:52.028Z (18 days ago)
Topics: file-import, r, r-package, reproducibility, reproducible-research, reproducible-science, spectral-data, spectroscopy
Language: R
Homepage: https://docs.ropensci.org/lightr
Size: 9.08 MB
Stars: 15
Watchers: 2
Forks: 1
Open Issues: 15
Metadata Files:
- Readme: README.md
- Changelog: NEWS.md
- Contributing: .github/CONTRIBUTING.md
- License: LICENSE.md
- Codemeta: codemeta.json

CodeMeta metadata:

@context: https://doi.org/10.5063/schema/codemeta-2.0
@type: SoftwareSourceCode
Identifier: lightr
Description: Parse various reflectance/transmittance/absorbance spectra file formats to extract spectral data and metadata, as described in Gruson, White & Maia (2019) . Among other formats, it can import files from 'Avantes' , 'CRAIC' , and 'OceanInsight' (formerly 'OceanOptics') brands.
Name: lightr: Read Spectrometric Data and Metadata
Related link:
- https://docs.ropensci.org/lightr/
- https://CRAN.R-project.org/package=lightr
Code repository: https://github.com/ropensci/lightr
Issue tracker: https://github.com/ropensci/lightr/issues
License: https://spdx.org/licenses/GPL-2.0
Version: 1.7.0.9000
Programming language:
- @type: ComputerLanguage
- Name: R
- Url: https://r-project.org
Runtime platform: R version 4.2.1 (2022-06-23)
Provider:
- @id: https://cran.r-project.org
- @type: Organization
- Name: Comprehensive R Archive Network (CRAN)
- Url: https://cran.r-project.org
Author:
- - @type: Person
  - Given name: Hugo
  - Family name: Gruson
  - Email: hugo.gruson+R@normalesup.org
  - @id: https://orcid.org/0000-0002-4094-1476
- - @type: Person
  - Given name: Rafael
  - Family name: Maia
  - @id: https://orcid.org/0000-0002-7563-9795
- - @type: Person
  - Given name: Thomas
  - Family name: White
  - @id: https://orcid.org/0000-0002-3976-1734
Contributor:
- - @type: Person
  - Given name: Kotya
  - Family name: Karapetyan
Copyright holder:
- - @type: Person
  - Given name: Hugo
  - Family name: Gruson
  - Email: hugo.gruson+R@normalesup.org
  - @id: https://orcid.org/0000-0002-4094-1476
- - @type: Person
  - Given name: Rafael
  - Family name: Maia
  - @id: https://orcid.org/0000-0002-7563-9795
- - @type: Person
  - Given name: Thomas
  - Family name: White
  - @id: https://orcid.org/0000-0002-3976-1734
- - @type: Person
  - Given name: Kotya
  - Family name: Karapetyan
Maintainer:
- - @type: Person
  - Given name: Hugo
  - Family name: Gruson
  - Email: hugo.gruson+R@normalesup.org
  - @id: https://orcid.org/0000-0002-4094-1476
Software suggestions:
- - @type: SoftwareApplication
  - Identifier: digest
  - Name: digest
  - Provider:
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    - @type: Organization
    - Name: Comprehensive R Archive Network (CRAN)
    - Url: https://cran.r-project.org
  - Same as: https://CRAN.R-project.org/package=digest
- - @type: SoftwareApplication
  - Identifier: knitr
  - Name: knitr
  - Provider:
    - @id: https://cran.r-project.org
    - @type: Organization
    - Name: Comprehensive R Archive Network (CRAN)
    - Url: https://cran.r-project.org
  - Same as: https://CRAN.R-project.org/package=knitr
- - @type: SoftwareApplication
  - Identifier: pavo
  - Name: pavo
  - Provider:
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    - @type: Organization
    - Name: Comprehensive R Archive Network (CRAN)
    - Url: https://cran.r-project.org
  - Same as: https://CRAN.R-project.org/package=pavo
- - @type: SoftwareApplication
  - Identifier: rmarkdown
  - Name: rmarkdown
  - Provider:
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    - @type: Organization
    - Name: Comprehensive R Archive Network (CRAN)
    - Url: https://cran.r-project.org
  - Same as: https://CRAN.R-project.org/package=rmarkdown
- - @type: SoftwareApplication
  - Identifier: spelling
  - Name: spelling
  - Provider:
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    - @type: Organization
    - Name: Comprehensive R Archive Network (CRAN)
    - Url: https://cran.r-project.org
  - Same as: https://CRAN.R-project.org/package=spelling
- - @type: SoftwareApplication
  - Identifier: testthat
  - Name: testthat
  - Version: >= 3.0.0
  - Provider:
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    - @type: Organization
    - Name: Comprehensive R Archive Network (CRAN)
    - Url: https://cran.r-project.org
  - Same as: https://CRAN.R-project.org/package=testthat
- - @type: SoftwareApplication
  - Identifier: withr
  - Name: withr
  - Provider:
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    - @type: Organization
    - Name: Comprehensive R Archive Network (CRAN)
    - Url: https://cran.r-project.org
  - Same as: https://CRAN.R-project.org/package=withr
Software requirements:
- 1:
  - @type: SoftwareApplication
  - Identifier: R
  - Name: R
  - Version: >= 3.5.0
- 2:
  - @type: SoftwareApplication
  - Identifier: future.apply
  - Name: future.apply
  - Provider:
    - @id: https://cran.r-project.org
    - @type: Organization
    - Name: Comprehensive R Archive Network (CRAN)
    - Url: https://cran.r-project.org
  - Same as: https://CRAN.R-project.org/package=future.apply
- 3:
  - @type: SoftwareApplication
  - Identifier: progressr
  - Name: progressr
  - Provider:
    - @id: https://cran.r-project.org
    - @type: Organization
    - Name: Comprehensive R Archive Network (CRAN)
    - Url: https://cran.r-project.org
  - Same as: https://CRAN.R-project.org/package=progressr
- 4:
  - @type: SoftwareApplication
  - Identifier: xml2
  - Name: xml2
  - Version: >= 1.0.0
  - Provider:
    - @id: https://cran.r-project.org
    - @type: Organization
    - Name: Comprehensive R Archive Network (CRAN)
    - Url: https://cran.r-project.org
  - Same as: https://CRAN.R-project.org/package=xml2
- System requirements:
File size: 5295.415KB
Citation:
- - @type: ScholarlyArticle
  - Date published: 2019
  - Author:
    - - @type: Person
      - Given name: Hugo
      - Family name: Gruson
    - - @type: Person
      - Given name: Thomas
      - Family name: White
    - - @type: Person
      - Given name: Rafael
      - Family name: Maia
  - Name: lightr: import spectral data and metadata in R
  - Identifier: 10.21105/joss.01857
  - Url: https://doi.org/10.21105/joss.01857
  - Pagination: 1857
  - @id: https://doi.org/10.21105/joss.01857
  - Same as: https://doi.org/10.21105/joss.01857
  - Is part of:
    - @type: PublicationIssue
    - Issue number: 43
    - Date published: 2019
    - Is part of:
      - @type:
        PublicationVolume
        Periodical
      - Volume number: 4
      - Name: Journal of Open Source Software
Release notes: https://github.com/ropensci/lightr/blob/master/NEWS.md
Readme: https://github.com/ropensci/lightr/blob/main/README.md
Cont integration:
- https://github.com/ropensci/lightr/actions
- https://codecov.io/github/ropensci/lightr?branch=main
Development status: https://lifecycle.r-lib.org/articles/stages.html
Review:
- @type: Review
- Url: https://github.com/ropensci/software-review/issues/267
- Provider: https://ropensci.org
Keywords:
- r
- spectroscopy
- spectral-data
- reproducible-research
- reproducible-science
- reproducibility
- r-package
- file-import

Owner metadata:

Name: rOpenSci
Login: ropensci
Email: info@ropensci.org
Kind: organization
Description:
Website: https://ropensci.org/
Location: Berkeley, CA
Twitter: rOpenSci
Company:
Icon url: https://avatars.githubusercontent.com/u/1200269?v=4
Repositories: 307
Last Synced at: 2023-03-10T20:30:59.242Z
Profile URL: https://github.com/ropensci

GitHub Events

Total

Create event: 11
Delete event: 16
Issue comment event: 10
Issues event: 9
Pull request event: 18
Pull request review comment event: 14
Pull request review event: 7
Push event: 64
Release event: 2
Watch event: 1
Total: 152

Last Year

Create event: 8
Delete event: 11
Issue comment event: 6
Issues event: 6
Pull request event: 14
Pull request review comment event: 14
Pull request review event: 7
Push event: 53
Release event: 1
Watch event: 1
Total: 121

Committers metadata

Last synced: 4 days ago

Total Commits: 836
Total Committers: 34
Avg Commits per committer: 24.588
Development Distribution Score (DDS): 0.041

Commits in past year: 96
Committers in past year: 2
Avg Commits per committer in past year: 48.0
Development Distribution Score (DDS) in past year: 0.021

Name	Email	Commits
Hugo Gruson	h**n@p**m	802
Copilot	1****t	2
runner	r**r@M**l	1
runner	r**r@M**l	1
runner	r**r@M**l	1
runner	r**r@M**l	1
runner	r**r@M**l	1
runner	r**r@M**l	1
runner	r**r@M**l	1
runner	r**r@M**l	1
runner	r**r@M**l	1
runner	r**r@M**l	1
runner	r**r@M**l	1
runner	r**r@M**l	1
runner	r**r@M**l	1
runner	r**r@M**l	1
runner	r**r@M**l	1
runner	r**r@M**l	1
runner	r**r@M**l	1
runner	r**r@M**l	1
runner	r**r@M**l	1
runner	r**r@M**l	1
runner	r**r@M**l	1
runner	r**r@M**l	1
runner	r**r@M**l	1
runner	r**r@M**l	1
runner	r**r@M**l	1
runner	r**r@M**l	1
runner	r**r@M**l	1
runner	r**r@M**l	1
and 4 more...

Issue and Pull Request metadata

Last synced: 4 days ago

Total issues: 48
Total pull requests: 44
Average time to close issues: 9 months
Average time to close pull requests: about 2 months
Total issue authors: 5
Total pull request authors: 4
Average comments per issue: 0.79
Average comments per pull request: 0.59
Merged pull request: 38
Bot issues: 0
Bot pull requests: 0

Past year issues: 5
Past year pull requests: 14
Past year average time to close issues: 25 days
Past year average time to close pull requests: 1 day
Past year issue authors: 1
Past year pull request authors: 2
Past year average comments per issue: 0.2
Past year average comments per pull request: 0.93
Past year merged pull request: 11
Past year bot issues: 0
Past year bot pull requests: 0

More stats: https://issues.ecosyste.ms/repositories/lookup?url=https://github.com/ropensci/lightr

Top Issue Authors

Bisaloo (44)
itamshab (1)
maelle (1)
bittonp (1)
jeroen (1)

Top Pull Request Authors

Bisaloo (39)
maelle (2)
Copilot (2)
danielskatz (1)

Top Issue Labels

Type: enhancement (13)
help wanted (11)
good first issue (7)
Scope: testing (4)
Type: bug (4)
question (3)
Scope: performance (2)
Scope: UX/docs (2)
upkeep (1)

Top Pull Request Labels

Status: blocked (1)

Package metadata

Total packages: 1
Total downloads:
- cran: 1,022 last-month
Total dependent packages: 1
Total dependent repositories: 2
Total versions: 15
Total maintainers: 1

cran.r-project.org: lightr

Read Spectrometric Data and Metadata

Homepage: https://docs.ropensci.org/lightr/
Documentation: http://cran.r-project.org/web/packages/lightr/lightr.pdf
Licenses: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
Latest release: 2.0.0 (published 2 months ago)
Last Synced: 2026-06-19T22:00:55.029Z (4 days ago)
Versions: 15
Dependent Packages: 1
Dependent Repositories: 2
Downloads: 1,022 Last month
Rankings:
- Stargazers count: 15.792%
- Dependent packages count: 18.104%
- Average: 18.645%
- Dependent repos count: 19.15%
- Downloads: 19.191%
- Forks count: 20.988%
Maintainers (1)
- hugo.gruson+R@normalesup.org

Dependencies

.github/workflows/lint-changed-files.yaml actions

actions/checkout v3 composite
r-lib/actions/setup-r v2 composite
r-lib/actions/setup-r-dependencies v2 composite

.github/workflows/R-CMD-check.yaml actions

actions/checkout v3 composite
r-lib/actions/check-r-package v2 composite
r-lib/actions/setup-pandoc v2 composite
r-lib/actions/setup-r v2 composite
r-lib/actions/setup-r-dependencies v2 composite

.github/workflows/codemeta.yml actions

actions/checkout v1 composite
r-lib/actions/setup-r v1 composite

.github/workflows/test-coverage.yaml actions

actions/checkout v3 composite
actions/upload-artifact v3 composite
r-lib/actions/setup-r v2 composite
r-lib/actions/setup-r-dependencies v2 composite

DESCRIPTION cran

R >= 3.5.0 depends
future.apply * imports
progressr * imports
xml2 >= 1.0.0 imports
digest * suggests
knitr * suggests
lintr * suggests
pavo * suggests
rmarkdown * suggests
spelling * suggests
testthat >= 3.0.0 suggests
withr * suggests

.github/workflows/rhub.yaml actions

r-hub/actions/checkout v1 composite
r-hub/actions/platform-info v1 composite
r-hub/actions/run-check v1 composite
r-hub/actions/setup v1 composite
r-hub/actions/setup-deps v1 composite
r-hub/actions/setup-r v1 composite

.github/workflows/touchstone-comment.yaml actions

lorenzwalthert/touchstone/actions/comment c470b4489d6b553800657abcef5c28a46f1b49f5 composite

.github/workflows/touchstone-receive.yaml actions

actions/checkout v5 composite
lorenzwalthert/touchstone/actions/receive c470b4489d6b553800657abcef5c28a46f1b49f5 composite

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