JOSS: https://github.com/bjmt/universalmotif
motif-analysis motif-enrichment-analysis r sequence-logo
Score: 5.736572297479192
Last synced: about 12 hours ago
JSON representation
Repository metadata:
Motif manipulation functions for R.
- Host: GitHub
- URL: https://github.com/bjmt/universalmotif
- Owner: bjmt
- License: gpl-3.0
- Created: 2017-02-22T14:10:28.000Z (over 9 years ago)
- Default Branch: master
- Last Pushed: 2025-09-29T17:57:03.000Z (9 months ago)
- Last Synced: 2026-03-05T19:17:25.168Z (4 months ago)
- Topics: motif-analysis, motif-enrichment-analysis, r, sequence-logo
- Language: R
- Homepage:
- Size: 13 MB
- Stars: 30
- Watchers: 2
- Forks: 10
- Open Issues: 1
-
Metadata Files:
- Readme: README.md
- Changelog: NEWS
- Contributing: CONTRIBUTING.md
- License: LICENSE
- Citation: CITATION.cff
Owner metadata:
- Name: Benjamin Jean-Marie Tremblay
- Login: bjmt
- Email:
- Kind: user
- Description:
- Website:
- Location:
- Twitter:
- Company:
- Icon url: https://avatars.githubusercontent.com/u/24674853?u=672053d1d6220dad265ca7e0ee06180c8326e09a&v=4
- Repositories: 1
- Last Synced at: 2023-03-05T09:30:10.178Z
- Profile URL: https://github.com/bjmt
GitHub Events
Total
- Create event: 4
- Issue comment event: 4
- Issues event: 2
- Pull request event: 2
- Push event: 10
- Watch event: 4
- Total: 26
Last Year
- Create event: 2
- Issue comment event: 1
- Pull request event: 2
- Push event: 7
- Watch event: 1
- Total: 13
Committers metadata
Last synced: 3 months ago
Total Commits: 1,032
Total Committers: 10
Avg Commits per committer: 103.2
Development Distribution Score (DDS): 0.058
Commits in past year: 11
Committers in past year: 3
Avg Commits per committer in past year: 3.667
Development Distribution Score (DDS) in past year: 0.273
| Name | Commits | |
|---|---|---|
| bjmt | b****y@g****m | 972 |
| snystrom | s****m | 27 |
| Nitesh Turaga | n****a@g****m | 14 |
| J Wokaty | j****y@s****u | 10 |
| vobencha | v****a@g****m | 2 |
| Benjamin Jean-Marie Tremblay | b****n@B****l | 2 |
| A Wokaty | a****y@s****u | 2 |
| Stevie Ped | s****u@g****m | 1 |
| Hervé Pagès | h****b@g****m | 1 |
| Benjamin Jean-Marie Tremblay | b****n@M****l | 1 |
Issue and Pull Request metadata
Last synced: 9 months ago
Total issues: 20
Total pull requests: 10
Average time to close issues: 10 days
Average time to close pull requests: 2 days
Total issue authors: 15
Total pull request authors: 3
Average comments per issue: 4.7
Average comments per pull request: 2.8
Merged pull request: 7
Bot issues: 0
Bot pull requests: 0
Past year issues: 1
Past year pull requests: 2
Past year average time to close issues: 12 days
Past year average time to close pull requests: 3 days
Past year issue authors: 1
Past year pull request authors: 1
Past year average comments per issue: 3.0
Past year average comments per pull request: 1.5
Past year merged pull request: 1
Past year bot issues: 0
Past year bot pull requests: 0
Top Issue Authors
- snystrom (6)
- chrisamiller (1)
- avergro (1)
- RdeBiotec (1)
- smped (1)
- manoloff (1)
- ruixuan-zhang (1)
- doliv071 (1)
- kentaloupe123 (1)
- OXB-DC (1)
- Mjaraespejo (1)
- MattBrauer (1)
- VangelisTheodorakis (1)
- aspepin (1)
- JianGuoZhou3 (1)
Top Pull Request Authors
- snystrom (7)
- smped (2)
- Irenexzwen (1)
Top Issue Labels
Top Pull Request Labels
Dependencies
- R >= 3.5.0 depends
- PWMEnrich * enhances
- rGADEM * enhances
- BiocGenerics * imports
- Biostrings * imports
- IRanges * imports
- MASS * imports
- Rcpp * imports
- S4Vectors * imports
- ggplot2 * imports
- grid * imports
- methods * imports
- rlang * imports
- stats * imports
- utils * imports
- yaml * imports
- BiocParallel * suggests
- GenomicRanges * suggests
- MotifDb * suggests
- TFBSTools * suggests
- ape * suggests
- bookdown * suggests
- cowplot * suggests
- dplyr * suggests
- ggbio * suggests
- ggseqlogo * suggests
- ggtree * suggests
- knitr * suggests
- motifStack * suggests
- processx * suggests
- rmarkdown * suggests
- seqLogo * suggests
- spelling * suggests
- testthat * suggests