https://github.com/IMMM-SFA/tell
A model to predict Total ELectricity Loads (TELL)
Last synced: 21 Jun 2026
https://github.com/brainets/frites
Framework for Information Theoretical analysis of Electrophysiological data and Statistics
brainhack brainhack-marseille brainweb cluster-based electrophysiological-data ffx functional-connectivity gaussian-copula group-level information-theory institut-neurosciences-timone neurophysiological-data rfx statistics
Last synced: 21 Jun 2026
https://github.com/cgrudz/DataAssimilationBenchmarks.jl
Package Information and Documentation
Last synced: 21 Jun 2026
https://github.com/ggonnella/fastsubtrees
Python library and command line script , for fast extraction of subtrees of fairly large trees, consisting of millions of nodes, such as the NCBI taxonomy tree.
bioinformatics ncbi-taxonomy python subtree subtree-extraction subtree-query taxonomy tree
Last synced: 21 Jun 2026
https://gitlab.com/petsc/petsc
PETSc, pronounced PET-see (the S is silent), is a suite of data structures and routines for the scalable (parallel) solution of scientific applications modeled by partial differential equations.
Last synced: 21 Jun 2026
https://github.com/jonathanHuwP/CrystalGrowthTracker
Extract face growth rate data from x-ray video of growing crystals.
Last synced: 21 Jun 2026
https://github.com/kavir1698/EvoDynamics.jl
Simulation of eco-evolutionary dynamics on multi-trait networks
Last synced: 21 Jun 2026
https://github.com/Natsiopoulos/ARDL
ARDL, ECM and Bounds-Test for Cointegration
Last synced: 21 Jun 2026
https://github.com/ConnorDonegan/geostan
Bayesian spatial analysis
bayesian bayesian-inference bayesian-statistics epidemiology modeling public-health r r-package rspatial rstats spatial stan
Last synced: 21 Jun 2026
https://github.com/SotaYoshida/NuclearToolkit.jl
NuclearToolkit.jl: Julia package for nuclear structure calculations
Last synced: 21 Jun 2026
https://github.com/masadcv/FastGeodis
Fast Implementation of Generalised Geodesic Distance Transform for CPU (OpenMP) and GPU (CUDA)
deep-learning gpu pytorch
Last synced: 21 Jun 2026
https://github.com/dunnkers/fseval
Benchmarking framework for Feature Selection and Feature Ranking algorithms 🚀
automl benchmarking benchmarking-framework benchmarks feature-rankers feature-ranking feature-selection hydra machine-learning python scikit-learn wandb
Last synced: 21 Jun 2026
https://github.com/tensorly/viz
Easy visualization and evaluation of matrix and tensor factorization models
tensor-methods tensorly tensors visualization
Last synced: 21 Jun 2026
https://github.com/AP6YC/ClusterValidityIndices.jl
A Julia package for Cluster Validity Indices (CVIs).
clustering julia julia-language machine-learning
Last synced: 21 Jun 2026
https://github.com/ICAMS/strucscan
A lightweight python-based framework for high-throughput material simulation
Last synced: 21 Jun 2026
https://github.com/NorwegianVeterinaryInstitute/ALPPACA
A tooL for Prokaryotic Phylogeny And Clustering Analysis
clustering nextflow phylogeny pipeline
Last synced: 21 Jun 2026
https://github.com/milnus/Corekaburra
Program to find core gene consensus synteny, hotspots between these, and construct spatially aware multiple sequence alignments of core genes
Last synced: 21 Jun 2026
https://gitlab.com/wpettersson/kep_solver
A Python package for reading and solving single instances of kidney exchange problems.
Last synced: 21 Jun 2026
https://github.com/SMTG-Bham/ShakeNBreak
Defect structure-searching employing chemically-guided bond distortions
ab-initio computational-chemistry dft distortions materials materials-design materials-informatics point-defects pymatgen python3 science semiconductors structure-searching symmetry-breaking vasp
Last synced: 22 Jun 2026
https://github.com/pydemull/activAnalyzer
accelerometer actigraph app monitor r shiny
Last synced: 21 Jun 2026
https://github.com/txopen/histoc
Histocompatibility analysis performed by kidney allocation systems for transplantation
Last synced: 21 Jun 2026
https://github.com/RemoteSensingTools/vSmartMOM.jl
A full end-to-end modular software suite for radiative transfer and related atmospheric analysis
Last synced: 21 Jun 2026
https://github.com/kathlandgren/SWAMPE
2D spectral-core shallow-water exoplanet atmosphere model
Last synced: 21 Jun 2026
https://github.com/ppsp-team/PyNM
Lightweight Python implementation of Normative Modelling
Last synced: 21 Jun 2026
https://github.com/lmiconsulting/cosasi/
COntagion Simulation And Source Identification: a Python package for graph diffusion source inference
cyber disease-simulation epidemics graph-algorithms graph-theory message-passing network-analysis network-science python
Last synced: 21 Jun 2026
https://github.com/vyrjana/DearEIS
A GUI program for analyzing, simulating, and visualizing impedance spectra.
electrochemistry impedance impedance-spectroscopy python
Last synced: 21 Jun 2026
https://github.com/Eden-Kramer-Lab/spectral_connectivity
Frequency domain estimation and functional and directed connectivity analysis tools for electrophysiological data
brain-connectivity canonical-coherence coherence connectivity-measures electrophysiology frequency-domain global-coherence multitaper neuroscience phase-lag-index python spectral-granger-causality spectrogram
Last synced: 21 Jun 2026
https://github.com/terminological/dtrackr
An R library for managing and documenting dplyr data pipelines
Last synced: 21 Jun 2026
https://gitlab.com/InspectorCell/inspectorcell
InspectorCell provides an efficient workflow and graphical interface to generate high-quality training datasets from highly multiplexed microscopy images.
Last synced: 21 Jun 2026
https://github.com/SYalouz/QuantNBody
QuantNBody : a python package for quantum chemistry/physics to manipulate many-body operators and wave functions.
Last synced: 21 Jun 2026
https://github.com/danielenricocahall/elephas
Distributed Deep learning with Keras & Spark
Last synced: 21 Jun 2026
https://github.com/dianna-ai/dianna
Deep Insight And Neural Network Analysis
explainable-artificial-intelligence scientific-research
Last synced: 21 Jun 2026
https://github.com/quantling/pyndl
pyndl implements a Naive discriminative learning which is a learning and classification models based on the Rescorla-Wagner equations in python3.
Last synced: 21 Jun 2026
https://github.com/siavashk/pycpd
Pure Numpy Implementation of the Coherent Point Drift Algorithm
expectation-maximization point-cloud python registration
Last synced: 21 Jun 2026
https://github.com/freqtrade/freqtrade
Free, open source crypto trading bot
algorithmic-trading bitcoin cryptocurrencies cryptocurrency freqtrade python telegram-bot trade trading-bot
Last synced: 22 Jun 2026
https://github.com/CliMA/EnsembleKalmanProcesses.jl
Implements Optimization and approximate uncertainty quantification algorithms, Ensemble Kalman Inversion, and Ensemble Kalman Processes.
Last synced: 22 Jun 2026
https://github.com/mmore500/hstrat
hstrat enables phylogenetic inference on distributed digital evolution populations
Last synced: 22 Jun 2026
https://github.com/JuliaSmoothOptimizers/PDENLPModels.jl
A NLPModel API for optimization problems with PDE-constraints
Last synced: 21 Jun 2026
https://github.com/jjmccollum/teiphy
A Python package for converting TEI XML collations to NEXUS, BEAST 2.7 XML, and other formats
nexus phylogenetics python tei-xml text-encoding
Last synced: 21 Jun 2026
https://github.com/gnudatalanguage/gdl
GDL - GNU Data Language
antlr astronomy data-analysis dicom eigen3 fits-files geophysics grib gsl-library hdf hdf5 mapping netcdf plotting plplot programming-language pv-wave python scientific-computing scientific-visualization
Last synced: 22 Jun 2026
https://github.com/sebastian-zieba/PACMAN
PACMAN is a pipeline to reduce and analyze data collected by Hubble Wide Field Camera 3 (HST/WFC3) using either the G102 or G141 grism.
astronomy exoplanets hst python wfc3
Last synced: 21 Jun 2026
https://github.com/ropensci/daiquiri
Data quality reporting for temporal datasets.
data-quality initial-data-analysis r r-package reproducible-research rstats temporal-data time-series
Last synced: 21 Jun 2026
https://github.com/MeasureTransport/MParT
Monotone Parameterization Toolkit (MParT): A core library for constructing and using transport maps.
Last synced: 21 Jun 2026
https://github.com/statdivlab/rigr
Regression, Inference, and General Data Analysis Tools for R
regression statistics
Last synced: 21 Jun 2026
https://gite.lirmm.fr/doccy/RedOak
RedOak stand for Reference-free[d] Optimized approach byk-mers, RedOak is an alignment-free and reference-free software which allows to index a large collection of similar genomes. RedOak can also be applied to reads from unassembled genomes.
Last synced: 21 Jun 2026
https://github.com/fbreitwieser/krakenuniq
🐙 KrakenUniq: Metagenomics classifier with unique k-mer counting for more specific results
bioinformatics metagenomics
Last synced: 21 Jun 2026
https://github.com/vortex-exoplanet/VIP
VIP is a python package/library for angular, reference star and spectral differential imaging for exoplanet/disk detection through high-contrast imaging.
data-processing extrasolar-planets-disks high-contrast-imaging image-processing low-rank-approximation mcmc pca
Last synced: 21 Jun 2026
https://github.com/szhorvat/IGraphM
IGraph/M is the igraph interface for Mathematica
graph-algorithms graph-theory igraph mathematica mathematics network-analysis network-graph raspberry-pi wolfram-language
Last synced: 21 Jun 2026
https://github.com/ComputationalPhysiology/simcardems
Simula Cardiac ElectroMechanics Solver
Last synced: 21 Jun 2026
https://gitlab.com/programgreg/tagginglatencyestimator
Software to estimate the latency of the tagging process.
Last synced: 21 Jun 2026
https://github.com/Pizzuti92/MG-MAMPOSSt
MG-MAMPOSSt is a FORTRAN code that extended the MAMPOSSt algorithm of G. Mamon, A. Biviano and G. Boué, that performs Bayesian fits of models of mass and velocity anisotropy profiles to the distribution of tracers in projected phase space, to handle modified gravity models and constrain its parameters. The new version implements two distinct types of gravity modifications, namely general chameleon (including $f(\mathcal{R})$ models) and beyond Horndeski gravity (Vainshtein screening).
Last synced: 21 Jun 2026
https://github.com/tkonolige/city2ba
Tools for generating synthetic bundle adjustment datasets
bundle-adjustment
Last synced: 21 Jun 2026
https://github.com/MartianColonist/POSEIDON
Multidimensional atmospheric retrieval of exoplanet spectra.
Last synced: 21 Jun 2026
https://gitlab.com/ProjectRHEA/flowsolverrhea
RHEA: an open-source Reproducible Hybrid-architecture flow solver Engineered for Academia
Last synced: 21 Jun 2026
https://github.com/Jacks0nJ/PyFPT
Stochastic first-passage time (FPT) simulations using importance sampling.
cosmology cython first-passage-times importance-sampling inflation stochastic
Last synced: 21 Jun 2026
https://github.com/ianfhunter/GNOLL
GNOLL is an efficient dice notation parser for multiple programming languages that supports a wide set of dice notation
board-game c cpp dice dice-notation dice-roller dice-rolls go golang haskell java javascript js julia perl python r roleplaying-games rpg-dice-roller ttrpg
Last synced: 21 Jun 2026
https://github.com/N-Wouda/ALNS
Adaptive large neighbourhood search (and more!) in Python.
adaptive-large-neighbourhood-search alns cutting-stock-problem flow-shop metaheuristic operations-research python rcpsp scheduling-problem travelling-salesman-problem tsp vehicle-routing-problem vrp
Last synced: 21 Jun 2026
https://github.com/lorenzo-rovigatti/oxDNA
The standalone code to simulate the oxDNA/oxRNA models, now equipped with Python bindings and the oxDNA_analysis_tools suite
dna physics-simulation simulation
Last synced: 21 Jun 2026
https://github.com/sjbeckett/localcovid19now
processing and mapping COVID-19 case data at subnational scales
Last synced: 21 Jun 2026
https://github.com/ropensci/spiro/
Work with data from cardiopulmonary exercise testing
Last synced: 21 Jun 2026
https://github.com/BiomedSciAI/fuse-med-ml
A python framework accelerating ML based discovery in the medical field by encouraging code reuse. Batteries included :)
ai cmmd collaboration ct deep-learning fuse fuse-med-ml fusemedml hacktoberfest healthcare isic knight-challenge machine-learning medical medical-imaging multimodality python pytorch stoic vision
Last synced: 22 Jun 2026
https://github.com/schochastics/signnet
R package for signed networks
network-analysis signed-networks sna
Last synced: 21 Jun 2026
https://github.com/SuperKogito/spafe
:sound: spafe: Simplified Python Audio Features Extraction
audio audio-analysis beat dsp features-extraction filterbank frequencies frequency frequency-analysis gammatone-filterbanks mfcc music music-information-retrieval pitch python signal-processing sound speech-processing time-frequency-analysis voice
Last synced: 21 Jun 2026
https://github.com/annajenul/UBayFS
UBayFS implements the UBayFS feature selection framework, together with an interactive Shiny dashbord.
bayesian-statistics ensemble-models feature-selection r user-knowledge
Last synced: 21 Jun 2026
https://github.com/martinlackner/abcvoting
Python implementations of approval-based committee (multi-winner) voting rules
approval-voting committee computational-social-choice multiwinnervoting python research social-choice social-choice-theory voting voting-methods
Last synced: 21 Jun 2026
https://github.com/PyAutoLabs/PyAutoGalaxy
PyAutoGalaxy: Open-Source Multiwavelength Galaxy Structure & Morphology
astronomy astrophysics galaxies image-processing morphology python
Last synced: 21 Jun 2026
https://github.com/rhdtownsend/msg
Multidimensional Spectral Grids
astrophysics
Last synced: 21 Jun 2026
https://github.com/Rocsg/FijiRelax
FijiRelax: 3D+t multi-echo spin-echo sequences MRI analysis
image-processing imagej imagej-plugins java modeling mri relaxation-time
Last synced: 21 Jun 2026
https://github.com/nickelnine37/pykronecker
A python library for creating Kronecker Product operators with efficient lazy computation
Last synced: 21 Jun 2026
https://gitlab.com/dglaeser/fieldcompare
Python package with command-line interface to compare field data
Last synced: 21 Jun 2026
https://github.com/tud-hri/joan
JOAN is an software package that allows to perform human-in-the loop experiments in the open source driving simulator CARLA. JOAN facilitates communication between human input devices and CARLA, the implementation of haptic feedback, systematically storing experiment data, and the automatic execution of experiments with multiple experimental conditions.
driving-simulator experiments human-in-the-loop
Last synced: 21 Jun 2026
https://github.com/mlpack/mlpack
mlpack: a fast, header-only C++ machine learning library
c-plus-plus deep-learning hacktoberfest machine-learning machine-learning-library nearest-neighbor-search regression scientific-computing
Last synced: 22 Jun 2026
https://github.com/hydrosolutions/riversCentralAsia/
Package with helper functions to load, manage and analyze hydrometeorological data from Central Asia
Last synced: 21 Jun 2026
https://github.com/inrae/RCaNmodel/
repository for RCaN and RCaNconstructor
Last synced: 21 Jun 2026
https://github.com/bjmorgan/py-sc-fermi
py-sc-fermi is a materials modelling code for calculating self-consistent Fermi energies and defect concentrations under thermodynamic equilibrium (or quasi-equilibrium) given defect formation energies.
Last synced: 21 Jun 2026
https://github.com/parmoo/parmoo
Python library for parallel multiobjective simulation optimization
blackbox-optimization mathematical-software multicriteria-optimization multiobjective multiobjective-optimization numerical-optimization python3 response-surface-methodology simulation-based-optimization simulation-optimization surrogate-based-optimization
Last synced: 21 Jun 2026
https://github.com/ttarkowski/quile
C++ genetic algorithms scientific library
cplusplus-20 cpp cpp-lib cpp-libraries cpp-library cpp20 cpp20-lib cpp20-library evolutionary-algorithm evolutionary-algorithms evolutionary-computation genetic-algorithm genetic-algorithms header-only header-only-library library
Last synced: 21 Jun 2026
https://github.com/CLOVER-energy/CLOVER
CLOVER minigrid simulation and optimisation for supporting rural electrification in developing countries
Last synced: 22 Jun 2026
https://github.com/olivecha/guitarsounds
python library to analyse guitar sounds
Last synced: 21 Jun 2026
https://github.com/ThomasMBury/ewstools
Python package for early warning signals (EWS) of bifurcations in time series data.
autocorrelation bifurcation bootstrapping complex-systems critical-transitions early-warning-indicators early-warning-signals forecasting ipynb power-spectrum python resilience-indicators time-series tipping-point visualization
Last synced: 21 Jun 2026
https://github.com/fatmasevinck/enetLTS
Robust and sparse methods for high diemnsional data including gaussian, binomial and multinomial families
Last synced: 21 Jun 2026
https://github.com/mad-lab-fau/tpcp/
Pipeline and Dataset helpers for complex algorithm evaluation.
algorithms biosignals data-management data-science machine-learning python
Last synced: 21 Jun 2026
https://github.com/xpsi-group/xpsi
X-PSI: X-ray Pulse Simulation and Inference
astronomical-algorithms astronomy astrophysical-simulation astrophysics likelihood-functions modeling parameter-estimation posterior-sampling sampling statistics-modeling x-ray-astronomy
Last synced: 22 Jun 2026
https://github.com/mrempel/geohexviz
GeoHexViz - generating publication-quality geospatical visualization of hexagonally binned data
Last synced: 21 Jun 2026
https://github.com/s-abbas/robnptests
Robust two-sample tests for the location problem
Last synced: 21 Jun 2026
https://github.com/jdiasn/lidarSuit
Archived. Please check https://github.com/jdiasn/lidarwind
Last synced: 21 Jun 2026
https://github.com/blebon/directChillFoam
OpenFOAM solver for direct chill casting
casting computational-fluid-dynamics openfoam simulation
Last synced: 21 Jun 2026
https://github.com/benjaminbolling/RSW
A Computational Approach to Generate Multi-Shift Rotational Workforce Schedules.
Last synced: 21 Jun 2026
https://github.com/DLR-RM/BlenderProc
A procedural Blender pipeline for photorealistic training image generation
3d-engines 3d-front-dataset 3d-graphics 3d-reconstruction blender blender-installation blender-pipeline camera-positions camera-sampling computer-graphics depth-images pose-estimation python rendering segmentation suncg-scene synthetic synthetic-data
Last synced: 22 Jun 2026
