https://github.com/mathLab/EZyRB
Easy Reduced Basis method
autoencoder data-driven hacktoberfest model-order-reduction model-reduction non-intrusive-model-order-reduction pod-gpr pod-interpolation pod-nn proper-orthogonal-decomposition reduced-basis
Last synced: 22 Jun 2026
https://github.com/caley/OpenEPSim
General simulation code for ASEP like models on 1D lattices
Last synced: 22 Jun 2026
https://github.com/terrytangyuan/autoplotly
Automatic Generation of Interactive Visualizations for Statistical Results
data-visualization ggplot2 interactive-visualizations machine-learning plotly plotlyjs rstats statistics
Last synced: 22 Jun 2026
https://github.com/brian-rose/climlab/
Python package for process-oriented climate modeling
Last synced: 22 Jun 2026
https://github.com/ropensci/qualtRics
Download ⬇️ Qualtrics survey data directly into R!
api qualtrics qualtrics-api r r-package rstats survey survey-data
Last synced: 22 Jun 2026
https://github.com/rasbt/mlxtend
A library of extension and helper modules for Python's data analysis and machine learning libraries.
association-rules data-mining data-science machine-learning python supervised-learning unsupervised-learning
Last synced: 23 Jun 2026
https://github.com/JuliaEarth/GeoStats.jl
An extensible framework for geospatial data science and geostatistical modeling fully written in Julia
datascience geo geospatial geostatistics gis spatial-statistics statistical-learning statistics
Last synced: 23 Jun 2026
https://github.com/atmoschem/eixport
Export Emissions to Atmospheric Models
atmospheric-models atmospheric-science emissions exporting-emissions wrf
Last synced: 23 Jun 2026
https://github.com/ropensci/EndoMineR
Endoscopic and Pathological data extraction for various endo-pathological data extraction
endoscopy gastroenterology peer-reviewed r r-package rstats semi-structured-data text-mining
Last synced: 22 Jun 2026
https://github.com/virgesmith/humanleague
Microsynthesis using quasirandom sampling and/or IPF
c-plus-plus-11 microsynthesis nodejs python3 quasirandom r sampling-methods
Last synced: 23 Jun 2026
https://github.com/FluxML/Flux.jl
Relax! Flux is the ML library that doesn't make you tensor
data-science deep-learning flux machine-learning neural-networks the-human-brain
Last synced: 23 Jun 2026
https://github.com/ropensci/suppdata
Grabbing SUPPlementary DATA in R
peer-reviewed r r-package rstats
Last synced: 23 Jun 2026
https://github.com/achennu/microbenthos
Modeling framework for microbenthic habitats useful for studies in biogeochemistry and marine microbial ecology.
Last synced: 22 Jun 2026
https://github.com/iferres/phylen
Compute a phylogeny using EggNOG database
bioinformatics eggnog genome hidden-markov-models phylogeny r
Last synced: 22 Jun 2026
https://github.com/benjamin-allevius/scanstatistics
An R package for space-time anomaly detection using scan statistics.
anomaly-detection cluster r rcpp rcpparmadillo scan-statistics spatial spatio-temporal statistics
Last synced: 23 Jun 2026
https://github.com/casics/nostril
Nostril: Nonsense String Evaluator
detector gibberish identifier-string identifiers inference mining-software-repositories nonsense nonsense-string-evaluator source-code text-processing
Last synced: 22 Jun 2026
https://github.com/bblankrot/ParticleScattering.jl
A Julia package for solving two-dimensional electromagnetic scattering from numerous particles
computational-electromagnetics julia multiple optimization particle scattering
Last synced: 23 Jun 2026
https://github.com/OSC/ondemand
Supercomputing. Seamlessly. Open, Interactive HPC Via the Web
gateway hacktoberfest hpc hpc-applications
Last synced: 23 Jun 2026
https://github.com/DTChuck/HSImage
A Python and C++ library to allow interaction with ENVI-BIL hyperspectral images
Last synced: 22 Jun 2026
https://github.com/sepandhaghighi/pycm
Multi-class confusion matrix library in Python
accuracy ai artificial-intelligence classification confusion-matrix data data-analysis data-mining data-science deep-learning deeplearning evaluation machine-learning mathematics matrix ml multiclass-classification neural-network statistical-analysis statistics
Last synced: 23 Jun 2026
https://github.com/barbagroup/PetIBM
PetIBM - toolbox and applications of the immersed-boundary method on distributed-memory architectures
computational-fluid-dynamics gpu-computing immersed-boundary-method nvidia-amgx petsc
Last synced: 22 Jun 2026
https://github.com/dit/dit
Python package for information theory.
information-theory python
Last synced: 23 Jun 2026
https://github.com/siravan/fib_tf
electrophysiology ode-solver pde tensorflow
Last synced: 22 Jun 2026
https://github.com/mikldk/disclapmix
Discrete Laplace Mixture Inference using the EM Algorithm
Last synced: 22 Jun 2026
https://github.com/jrbourbeau/pyunfold
Iterative unfolding for Python
data-analysis deconvolution inverse-problems python regularization statistics unfolding
Last synced: 23 Jun 2026
https://github.com/octapps/octapps
Library of Octave functions for continuous gravitational-wave data analysis
Last synced: 22 Jun 2026
https://github.com/drostlab/philentropy
Information Theory and Distance Quantification with R
distance-measures distance-quantification information-theory jensen-shannon-divergence parametric-distributions r similarity-measures statistics
Last synced: 22 Jun 2026
https://github.com/SMTG-Bham/galore
Gaussian and Lorentzian smearing of simulated spectra
Last synced: 22 Jun 2026
https://github.com/edoddridge/aronnax
An idealised isopycnal model that can be run either with n+1/2 layers, or with n layers and variable bathymetry.
Last synced: 22 Jun 2026
https://github.com/mirzaevinom/egtplot
egtplot: A python package for 3-Strategy Evolutionary Games
dynamical-systems evolutionary-game-theory game-theory visualization
Last synced: 22 Jun 2026
https://github.com/UniNE-CHYN/mmappickle
Python 3 library to store memory mappable objects into pickle-compatible files
dictionary memory mmap python python-3 python-library python3
Last synced: 23 Jun 2026
https://github.com/j-faria/kima
Exoplanet detection in RVs with DNest4 and GPs
bayesian exoplanets gaussian-processes hacktoberfest radial-velocity
Last synced: 23 Jun 2026
https://github.com/strengejacke/sjmisc
Data transformation and utility functions for R
data-transformation data-wrangling labelled-data r recoding
Last synced: 22 Jun 2026
https://github.com/vsoch/helpme
command line daemon for helping you out
command-line containers docker github helper research-tool singularity uservoice
Last synced: 22 Jun 2026
https://github.com/ellessenne/rsimsum/
Analysis of simulation studies including Monte Carlo error
biostatistics monte-carlo-error r rstats simulation simulation-study simulations statistics
Last synced: 22 Jun 2026
https://github.com/spinicist/QUIT
A set of tools for processing Quantitative MR Images
Last synced: 22 Jun 2026
https://github.com/HPAC/matchpy
A library for pattern matching on symbolic expressions in Python.
pattern-matching python symbolic-expressions term-rewriting
Last synced: 22 Jun 2026
https://github.com/jfjlaros/bin-parser
General binary file parser.
binary json parser yaml
Last synced: 22 Jun 2026
https://github.com/ryneches/SuchTree
A Python library for fast, thread-safe computations on phylogenetic trees
Last synced: 22 Jun 2026
https://github.com/ropensci/phylogram
Dendrograms for Evolutionary Analysis
peer-reviewed r r-package rstats
Last synced: 23 Jun 2026
https://github.com/resibots/limbo
A lightweight framework for Gaussian processes and Bayesian optimization of black-box functions (C++11)
bayesian-optimization gaussian-processes optimization-framework optimization-library
Last synced: 22 Jun 2026
https://github.com/giuseppec/iml
iml: interpretable machine learning R package
Last synced: 22 Jun 2026
https://github.com/gregreen/dustmaps
A uniform interface for a number of 2D and 3D maps of interstellar dust reddening/extinction.
Last synced: 22 Jun 2026
https://github.com/dhhagan/py-opc
Python wrapper for the Alphasense OPC-N2 built around py-spidev
Last synced: 23 Jun 2026
https://github.com/dgasmith/opt_einsum
⚡️Optimizing einsum functions in NumPy, Tensorflow, Dask, and more with contraction order optimization.
contraction einsum gpu-acceleration performance python tensor tensor-contraction
Last synced: 22 Jun 2026
https://github.com/strengejacke/ggeffects
Estimated Marginal Means and Marginal Effects from Regression Models for ggplot2
estimated-marginal-means hacktoberfest marginal-effects prediction
Last synced: 23 Jun 2026
https://github.com/ashleefv/BeeNestABM
Agent-based model of spatiotemporal distribution of bumblebees in nests
Last synced: 22 Jun 2026
https://github.com/lebebr01/pdfsearch
Search pdf files for keywords.
keyword pdf r
Last synced: 23 Jun 2026
https://github.com/salabim/salabim
salabim - discrete event simulation
animation discrete-event-simulation logistics python
Last synced: 22 Jun 2026
https://github.com/IFB-ElixirFr/edam-browser
Former location of edam-browser
Last synced: 22 Jun 2026
https://github.com/ECSIM/opem
OPEM (Open Source PEM Fuel Cell Simulation Tool)
chemistry dynamic-analysis electrochemistry fuel-cell opem pem physics physics-simulation python script simulation simulator static-analysis static-analyzer
Last synced: 22 Jun 2026
https://github.com/cylc/cylc-flow
Cylc: a general purpose workflow engine with a gift for cycling
cycling-workflows cylc hacktoberfest job-scheduler metascheduler python scheduler scheduling workflow workflow-automation workflow-engine workflow-management
Last synced: 23 Jun 2026
https://github.com/astorfi/speechpy
:speech_balloon: SpeechPy - A Library for Speech Processing and Recognition: http://speechpy.readthedocs.io/en/latest/
feature-extraction python speech-recognition speechpy
Last synced: 23 Jun 2026
https://github.com/ropensci/nomisr
Access UK official statistics from the Nomis database through R.
api-client census-data demography geographic-data national-statistics official-statistics officialstatistics peer-reviewed r r-package rstats uk
Last synced: 22 Jun 2026
https://github.com/robwschlegel/heatwaveR
This GitHub repo contains all of the code for the heatwaveR package.
Last synced: 22 Jun 2026
https://github.com/momargoh/MCycle
A Python package for 1D sizing and analysis of thermodynamic power cycles
heat-exchanger heat-transfer power-cycle thermodynamics thermodynamics-models
Last synced: 22 Jun 2026
https://github.com/nismod/ukpopulation
Population and demographics projection module, developed for ITRC/MISTRAL
demographics population
Last synced: 22 Jun 2026
https://github.com/Frost-group/PolaronMobility.jl
Feynman's variational path-integral model for the Fröhlich polaron. Calculates temperature dependent polaron mobilities, and other polaron observables.
mobility path-integral physics polarons solid-state
Last synced: 22 Jun 2026
https://github.com/andrewthomasjones/logKDE
Kernel Density Estimates on (0,Inf)
Last synced: 22 Jun 2026
https://github.com/pdwaggoner/hhi
Calculate and Visualize Herfindahl-Hirschman Index Scores
Last synced: 23 Jun 2026
https://github.com/SMTG-Bham/sumo
Heavyweight plotting tools for ab initio calculations
computational-chemistry materials-science plotting python
Last synced: 23 Jun 2026
https://github.com/lucydot/effmass
Calculates various definitions of effective mass from the electronic bandstructure of a semiconductor.
Last synced: 23 Jun 2026
https://github.com/ropensci-archive/jstor
Import journal data from DfR (JSTOR)
jstor peer-reviewed r r-package rstats text-analysis text-mining
Last synced: 23 Jun 2026
https://github.com/lumenlearning/rise
RISE Analysis in R
continuous-improvement learning-analytics open-educational-resources
Last synced: 22 Jun 2026
https://github.com/tdaverse/TDAstats
R pipeline for computing persistent homology in topological data analysis. See https://doi.org/10.21105/joss.00860 for more details.
cran data-science ggplot2 homology homology-calculations homology-computation joss persistent-homology pipeline r r-package r-packages ripser tda topological-data-analysis topology topology-visualization visualization
Last synced: 23 Jun 2026
https://github.com/betteridiot/bamnostic
a pure Python multi-version tolerant, runtime and OS-agnostic Binary Alignment Map (BAM) file parser and random access tool
Last synced: 23 Jun 2026
https://github.com/JohnCoene/sigmajs
Σ sigma.js for R
htmlwidgets network-visualization r rstats sigmajs
Last synced: 23 Jun 2026
https://github.com/williamsbenjamin/blendR
Blending a Probablilty Sample and a Non-Probability Sample in a Capture-Recapture Setting
Last synced: 23 Jun 2026
https://github.com/yt-project/unyt
Handle, manipulate, and convert data with units in Python
Last synced: 23 Jun 2026
https://github.com/sdtaylor/pyPhenology
Plant phenology models in python with a scikit-learn inspired API
ecology ecology-modelling plants science
Last synced: 23 Jun 2026
https://github.com/j-andrews7/Genotify
A minimal desktop app for easy and convenient gene annotation and lookup.
bioinformatics desktop-application gene gene-annotation genetics lookup protein-function
Last synced: 23 Jun 2026
https://github.com/loftytopping/PyBox
A box-model that automatically creates and solves equations used to describe the evolution in atmospheric composition using Python with Numba and, optionally, Fortran.
atmospheric-science chemistry fortran numba
Last synced: 23 Jun 2026
https://github.com/bmorris3/aesop
ARC Echelle Spectroscopic Observation Pipeline (aesop)
astronomy python spectroscopy
Last synced: 22 Jun 2026
https://gitlab.com/moorepants/skijumpdesign
A ski jump design tool for equivalent fall height. Includes a library for 2D skiing simulations and a graphical web application for designing ski jumps.
design jump simulation ski snowboard sports terrain park
Last synced: 23 Jun 2026
https://github.com/steven-murray/powerbox
A python package for making arbitrarily structured, arbitrary-dimension boxes
Last synced: 23 Jun 2026
https://github.com/emptyport/js-emass
This is a JavaScript implementation of the emass algorithm for calculating accurate isotopic envelopes
Last synced: 23 Jun 2026
https://github.com/gallantlab/cottoncandy
sugar for s3
cloud-storage google-drive numpy-arrays python s3
Last synced: 23 Jun 2026
https://github.com/MonashBioinformaticsPlatform/RNAsik-pipe
RNAsik - more than just a pipeline
Last synced: 23 Jun 2026
https://github.com/dirmeier/datastructures
:rocket: Implementation of core data structures for R
algorithms datastructures r rcpp
Last synced: 23 Jun 2026
https://github.com/pdebuyl-lab/tidynamics
A tiny package to compute the dynamics of stochastic and molecular simulations
correlation molecular-dynamics numpy stochastic-process
Last synced: 23 Jun 2026
https://github.com/handley-lab/fgivenx
Functional Posterior Plotter
astrophysics astrostatistics bayesian-inference cosmology matplotlib plotting statistics
Last synced: 23 Jun 2026
https://github.com/federeghe/chronovise
Measurement-Based Probabilistic Timing Analysis framework
mbpta real-time research-tool wcet
Last synced: 23 Jun 2026
https://github.com/davidnsousa/bor
Data analysis for field behavior observations of dyadic social interactions
Last synced: 23 Jun 2026
https://github.com/palash1992/GEM
graph-embedding graph-embeddings link-prediction network-embedding network-visualization
Last synced: 22 Jun 2026
https://github.com/lmcinnes/umap
Uniform Manifold Approximation and Projection
dimensionality-reduction machine-learning topological-data-analysis umap visualization
Last synced: 23 Jun 2026
https://github.com/dflemin3/approxposterior
A Python package for approximate Bayesian inference and optimization using Gaussian processes
approximate-inference bayesian-inference bayesian-optimization gaussian-processes inference python
Last synced: 23 Jun 2026
https://github.com/jcmgray/quimb
A python library for quantum information and many-body calculations including tensor networks.
dmrg entanglement mera peps physics python python3 quantum quantum-circuit quantum-circuit-simulator quantum-computing tebd tensor-network tensor-networks tensors
Last synced: 23 Jun 2026
https://github.com/python-windrose/windrose/
A Python Matplotlib, Numpy library to manage wind data, draw windrose (also known as a polar rose plot), draw probability density function and fit Weibull distribution
matplotlib numpy pandas python speed wind windrose
Last synced: 23 Jun 2026
https://github.com/calliope-project/calliope
A multi-scale energy systems modelling framework
energy energy-system optimisation pyomo python
Last synced: 23 Jun 2026
https://github.com/scikit-tda/ripser.py
A Lean Persistent Homology Library for Python
data-science homology persistent-homology ripser tda topological-data-analysis topology
Last synced: 23 Jun 2026
https://github.com/ejhigson/nestcheck
Error analysis, diagnostic tests and plots for nested sampling calculations.
bayesian-inference dynamic-nested-sampling error-analysis nested-sampling python sampling-error
Last synced: 23 Jun 2026
https://github.com/scikit-beam/NeuNorm
Normalization of fits and tiff files
Last synced: 23 Jun 2026
https://github.com/mpascariu/ungroup
Estimating Smooth Distributions from Coarsely Binned Data - R Package
distributions glm smoothing ungrouping
Last synced: 23 Jun 2026
https://github.com/grg2rsr/SeqPeelSort
A spike sorting algorithm for single sensillum recordings
Last synced: 23 Jun 2026
