JOSS: https://github.com/Robaina/Pynteny

bioinformatics computational-biology genomics hmm hmmer metagenomics prokaryotic-genomes python synteny synteny-block

Score: 6.556778356158042

Last synced: about 23 hours ago
JSON representation

Repository metadata:

Query sequence database by HMMs arranged in predefined synteny structure

• Host: GitHub
• URL: https://github.com/Robaina/Pynteny
• Owner: Robaina
• License: apache-2.0
• Created: 2022-06-06T14:39:33.000Z (over 4 years ago)
• Default Branch: main
• Last Pushed: 2026-06-23T09:24:41.000Z (4 months ago)
• Last Synced: 2026-09-03T18:35:43.881Z (2 months ago)
• Topics: bioinformatics, computational-biology, genomics, hmm, hmmer, metagenomics, prokaryotic-genomes, python, synteny, synteny-block
• Language: Python
• Homepage: https://robaina.github.io/Pynteny
• Size: 22.9 MB
• Stars: 21
• Watchers: 1
• Forks: 2
• Open Issues: 1
• Metadata Files:
  • Readme: README.md
  • Contributing: CONTRIBUTING.md
  • License: LICENSE
  • Code of conduct: .github/CODE_OF_CONDUCT.md
  • Citation: CITATION.cff

---

Owner metadata:

• Name: Semidán Robaina
• Login: Robaina
• Email: semidan@hapdera.com
• Kind: user
• Description: Founder @ Hapdera AI & Computational Biology
• Website: https://hapdera.com
• Location: Atlantic Ocean
• Twitter: srobainae
• Company: Hapdera
• Icon url: https://avatars.githubusercontent.com/u/21340147?u=094757da81476df3c54e1556963f9cb9b515f362&v=4
• Repositories: 12
• Last Synced at: 2026-11-02T02:54:49.333Z
• Profile URL: https://github.com/Robaina

---

GitHub Events

Total

• Create event: 2
• Delete event: 5
• Issue comment event: 1
• Push event: 10
• Total: 18

Last Year

• Create event: 2
• Delete event: 5
• Push event: 10
• Total: 17

---

Committers metadata

Last synced: 2 days ago

Name	Email	Commits
Semidán Robaina Estévez	s****a@g****m	613
Alex Batisse	a****e@h****m	6

---

Issue and Pull Request metadata

Last synced: 2 days ago

More stats: https://issues.ecosyste.ms/repositories/lookup?url=https://github.com/Robaina/Pynteny

---

---

---

Package metadata

• Total packages: 1
• Total downloads:
  • pypi: 15 last-month
• Total dependent packages: 0
• Total dependent repositories: 0
• Total versions: 3
• Total maintainers: 1

---

Dependencies