JOSS: https://github.com/biogo/hts

Score: 23.652570405979127

Last synced: about 4 hours ago
JSON representation

Repository metadata:

biogo high throughput sequencing repository

Host: GitHub
URL: https://github.com/biogo/hts
Owner: biogo
License: bsd-3-clause
Created: 2015-03-13T00:45:42.000Z (almost 11 years ago)
Default Branch: master
Last Pushed: 2025-08-28T19:44:09.000Z (5 months ago)
Last Synced: 2025-11-09T10:02:43.691Z (3 months ago)
Language: Go
Homepage:
Size: 1.22 MB
Stars: 131
Watchers: 9
Forks: 41
Open Issues: 7
Metadata Files:
- Readme: README.md
- Contributing: CONTRIBUTING.md
- Funding: .github/FUNDING.yml
- License: LICENSE
- Codemeta: codemeta.json
Funding:
- Github: kortschak

CodeMeta metadata:

@context: https://raw.githubusercontent.com/mbjones/codemeta/master/codemeta.jsonld
@type: Code
Author:
- - @id: http://orcid.org/0000-0001-8295-2301
  - @type: Person
  - Email: dan.kortschak@adelaide.edu.au
  - Name: R Daniel Kortschak
  - Affiliation: School of Biological Sciences, The University of Adelaide
- - @id: https://orcid.org/0000-0003-1786-2216
  - @type: Person
  - Email: brentp@genetics.utah.edu
  - Name: Brent S Pedersen
  - Affiliation: Department of Human Genetics, University of Utah
- - @id: http://orcid.org/0000-0003-2404-5636
  - @type: Person
  - Email: david.adelson@adelaide.edu.au
  - Name: David L Adelson
  - Affiliation: School of Biological Sciences, The University of Adelaide
Identifier:
Code repository: https://github.com/biogo/hts
Date published: 2017-01-06
Date modified: 2017-02-01
Date created: 2017-01-06
Description: high throughput sequence handling for the Go language
Keywords: bioinformatics, high throughput sequencing, golang
License: BSD-3 like
Title: bíogo/hts
Version: v1.0.1

Owner metadata:

Name: bíogo
Login: biogo
Email:
Kind: organization
Description: bíogo is a bioinformatics library collection for Go
Website:
Location:
Twitter:
Company:
Icon url: https://avatars.githubusercontent.com/u/1227814?v=4
Repositories: 14
Last Synced at: 2023-02-28T17:20:29.475Z
Profile URL: https://github.com/biogo

GitHub Events

Total

Fork event: 1
Issue comment event: 1
Watch event: 2
Total: 4

Last Year

Fork event: 1
Issue comment event: 1
Watch event: 2
Total: 4

Committers metadata

Last synced: 3 months ago

Total Commits: 456
Total Committers: 9
Avg Commits per committer: 50.667
Development Distribution Score (DDS): 0.064

Commits in past year: 0
Committers in past year: 0
Avg Commits per committer in past year: 0.0
Development Distribution Score (DDS) in past year: 0.0

Name	Email	Commits
kortschak	d**k@a**u	427
Brent Pedersen	b**e@g**m	17
Egon Elbre	e**e@g**m	5
Yaz Saito	y**o@g**m	2
Wei Xu	x**7@g**m	1
Shengjing Zhu	z**j@d**g	1
Clayton Wheeler	c**r@g**m	1
Brennon Loveless	b**s@g**m	1
Jason Travis	j**s@t**g	1

Issue and Pull Request metadata

Last synced: 5 months ago

Total issues: 34
Total pull requests: 71
Average time to close issues: 2 months
Average time to close pull requests: 20 days
Total issue authors: 16
Total pull request authors: 12
Average comments per issue: 4.97
Average comments per pull request: 1.34
Merged pull request: 61
Bot issues: 0
Bot pull requests: 0

Past year issues: 0
Past year pull requests: 0
Past year average time to close issues: N/A
Past year average time to close pull requests: N/A
Past year issue authors: 0
Past year pull request authors: 0
Past year average comments per issue: 0
Past year average comments per pull request: 0
Past year merged pull request: 0
Past year bot issues: 0
Past year bot pull requests: 0

More stats: https://issues.ecosyste.ms/repositories/lookup?url=https://github.com/biogo/hts

Top Issue Authors

brentp (9)
kortschak (6)
dongweigogo (3)
bloveless (2)
yipal (2)
bsipos (2)
ZhongbaoShi (1)
mnsmar (1)
sb10 (1)
ns3116 (1)
seqyuan (1)
jpofmars (1)
chrchang (1)
nathanhaigh (1)
defgenx (1)

Top Pull Request Authors

kortschak (49)
brentp (8)
yasushi-saito (4)
bsipos (2)
xuweixw (2)
bloveless (2)
ckingsford (1)
egonelbre (1)
zhsj (1)
yipal (1)
AlanRace (1)
csw (1)

Top Issue Labels

Top Pull Request Labels

Package metadata

Total packages: 1
Total downloads: unknown
Total docker downloads: 15,067,665
Total dependent packages: 96
Total dependent repositories: 162
Total versions: 14

proxy.golang.org: github.com/biogo/hts

Homepage: https://github.com/biogo/hts
Documentation: https://pkg.go.dev/github.com/biogo/hts#section-documentation
Licenses: BSD-3-Clause
Latest release: v1.4.5 (published almost 2 years ago)
Last Synced: 2025-11-15T08:02:14.713Z (3 months ago)
Versions: 14
Dependent Packages: 96
Dependent Repositories: 162
Docker Downloads: 15,067,665
Rankings:
- Docker downloads count: 0.402%
- Dependent repos count: 0.491%
- Dependent packages count: 0.518%
- Average: 1.972%
- Forks count: 3.987%
- Stargazers count: 4.462%

Dependencies

go.mod go

github.com/biogo/boom v0.0.0-20150317015657-28119bc1ffc1
github.com/kortschak/utter v0.0.0-20190412033250-50fe362e6560
github.com/kr/pretty v0.2.0
github.com/ulikunitz/xz v0.5.10
gopkg.in/check.v1 v1.0.0-20190902080502-41f04d3bba15

go.sum go

github.com/biogo/boom v0.0.0-20150317015657-28119bc1ffc1
github.com/kortschak/utter v0.0.0-20190412033250-50fe362e6560
github.com/kr/pretty v0.2.0
github.com/kr/pty v1.1.1
github.com/kr/text v0.1.0
github.com/ulikunitz/xz v0.5.10
gopkg.in/check.v1 v1.0.0-20190902080502-41f04d3bba15

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