JOSS: https://github.com/biogo/biogo
Score: 20.533819271052298
Last synced: about 6 hours ago
JSON representation
Repository metadata:
biogo is a bioinformatics library for Go
- Host: GitHub
- URL: https://github.com/biogo/biogo
- Owner: biogo
- License: bsd-3-clause
- Created: 2015-03-14T10:09:42.000Z (over 11 years ago)
- Default Branch: master
- Last Pushed: 2024-03-28T20:15:27.000Z (over 2 years ago)
- Last Synced: 2026-07-30T14:57:12.661Z (15 days ago)
- Language: Go
- Homepage:
- Size: 3.96 MB
- Stars: 409
- Watchers: 30
- Forks: 52
- Open Issues: 7
-
Metadata Files:
- Readme: README.md
- Contributing: CONTRIBUTING.md
- Funding: .github/FUNDING.yml
- License: LICENSE
- Authors: AUTHORS
- Codemeta: codemeta.json
-
Funding:
- Github: kortschak
CodeMeta metadata:
- @context: https://raw.githubusercontent.com/mbjones/codemeta/master/codemeta.jsonld
- @type: Code
- Author:
- @id: http://orcid.org/0000-0001-8295-2301
- @type: Person
- Email: dan.kortschak@adelaide.edu.au
- Name: R Daniel Kortschak
- Affiliation: School of Biological Sciences, The University of Adelaide
- @id: http://orcid.org/0000-0001-8327-7643
- @type: Person
- Email: josharian@gmail.com
- Name: Josh Bleecher Snyder
- Affiliation:
- @id: http://orcid.org/0000-0002-3158-1763
- @type: Person
- Email: emarag@mail.med.upenn.edu
- Name: Manolis Maragkakis
- Affiliation: Department of Pathology and Laboratory Medicine, Perelman School of Medicine, University of Pennsylvania
- @id: http://orcid.org/0000-0003-2404-5636
- @type: Person
- Email: david.adelson@adelaide.edu.au
- Name: David L Adelson
- Affiliation: School of Biological Sciences, The University of Adelaide
- Identifier:
- Code repository: https://github.com/biogo/biogo
- Date published: 2017-01-05
- Date modified: 2017-01-05
- Date created: 2017-01-05
- Description: a simple high-performance bioinformatics toolkit for the Go language
- Keywords: bioinformatics, toolkit, golang
- License: BSD-3 like
- Title: bíogo
- Version: v1.0.1
Owner metadata:
- Name: bíogo
- Login: biogo
- Email:
- Kind: organization
- Description: bíogo is a bioinformatics library collection for Go
- Website:
- Location:
- Twitter:
- Company:
- Icon url: https://avatars.githubusercontent.com/u/1227814?v=4
- Repositories: 14
- Last Synced at: 2023-02-28T17:20:29.475Z
- Profile URL: https://github.com/biogo
GitHub Events
Total
- Fork event: 2
- Watch event: 20
- Total: 22
Last Year
- Watch event: 4
- Total: 4
Committers metadata
Last synced: 1 day ago
Total Commits: 503
Total Committers: 17
Avg Commits per committer: 29.588
Development Distribution Score (DDS): 0.258
Commits in past year: 0
Committers in past year: 0
Avg Commits per committer in past year: 0.0
Development Distribution Score (DDS) in past year: 0.0
| Name | Commits | |
|---|---|---|
| kortschak | d****k@a****u | 373 |
| kortschak | k****k@z****u | 92 |
| Josh Bleecher Snyder | j****n@g****m | 14 |
| Emmanouil "Manolis" Maragkakis | m****g@g****m | 5 |
| Gordon Gremme | g****n@g****g | 4 |
| Jason | j****s@t****g | 2 |
| Davor Kapsa | d****a@g****m | 2 |
| Olga Botvinnik | o****k@g****m | 2 |
| Brennon Loveless | b****t@b****m | 1 |
| Brent Pedersen (brentp) | b****e@g****m | 1 |
| Clayton Wheeler | c****r@g****m | 1 |
| Harry Scells | h****s@g****m | 1 |
| Jason Travis | J****s@n****u | 1 |
| Peter Mattis | p****s@g****m | 1 |
| Santiago Castro | s****0@h****m | 1 |
| Yasushi Saito | y****o@g****m | 1 |
| aboffin | p****k@g****m | 1 |
Issue and Pull Request metadata
Last synced: 12 months ago
Total issues: 47
Total pull requests: 43
Average time to close issues: about 1 month
Average time to close pull requests: 2 days
Total issue authors: 20
Total pull request authors: 16
Average comments per issue: 3.06
Average comments per pull request: 2.26
Merged pull request: 41
Bot issues: 0
Bot pull requests: 0
Past year issues: 0
Past year pull requests: 0
Past year average time to close issues: N/A
Past year average time to close pull requests: N/A
Past year issue authors: 0
Past year pull request authors: 0
Past year average comments per issue: 0
Past year average comments per pull request: 0
Past year merged pull request: 0
Past year bot issues: 0
Past year bot pull requests: 0
Top Issue Authors
- GoogleCodeExporter (21)
- brentp (3)
- kortschak (3)
- josharian (2)
- nileshpatra (2)
- bsipos (2)
- mys721tx (1)
- DanielRivasMD (1)
- thomas-bio (1)
- YspCoder (1)
- ygidtu (1)
- srynobio (1)
- mnsmar (1)
- mariokostelac (1)
- sis6789 (1)
Top Pull Request Authors
- kortschak (18)
- corburn (4)
- mnsmar (4)
- olgabot (2)
- josharian (2)
- gordon (2)
- dvrkps (2)
- bloveless (2)
- aboffin (1)
- bryant1410 (1)
- yxzzy-wtf (1)
- petermattis (1)
- brentp (1)
- hscells (1)
- yasushi-saito (1)
Top Issue Labels
- auto-migrated (21)
- Priority-Medium (20)
- Type-Defect (18)
- Type-Enhancement (3)
- unfortunate (1)
- Priority-Low (1)
Top Pull Request Labels
Package metadata
- Total packages: 12
- Total downloads: unknown
- Total docker downloads: 116,924
- Total dependent packages: 19 (may contain duplicates)
- Total dependent repositories: 20 (may contain duplicates)
- Total versions: 21
proxy.golang.org: github.com/biogo/biogo
bíogo is a bioinformatics library for the Go language.
- Homepage: https://github.com/biogo/biogo
- Documentation: https://pkg.go.dev/github.com/biogo/biogo#section-documentation
- Licenses: BSD-3-Clause
- Latest release: v1.0.4 (published almost 5 years ago)
- Last Synced: 2026-08-13T05:47:52.051Z (1 day ago)
- Versions: 5
- Dependent Packages: 19
- Dependent Repositories: 20
- Docker Downloads: 116,924
-
Rankings:
- Docker downloads count: 0.793%
- Dependent packages count: 1.147%
- Dependent repos count: 1.209%
- Average: 1.961%
- Stargazers count: 3.018%
- Forks count: 3.636%
proxy.golang.org: github.com/BioGO/biogo
bíogo is a bioinformatics library for the Go language.
- Homepage: https://github.com/BioGO/biogo
- Documentation: https://pkg.go.dev/github.com/BioGO/biogo#section-documentation
- Licenses: BSD-3-Clause
- Latest release: v1.0.4 (published almost 5 years ago)
- Last Synced: 2026-08-13T03:35:49.658Z (1 day ago)
- Versions: 5
- Dependent Packages: 0
- Dependent Repositories: 0
-
Rankings:
- Dependent packages count: 4.894%
- Average: 5.059%
- Dependent repos count: 5.223%
proxy.golang.org: gopkg.in/biogo/biogo.v1
bíogo is a bioinformatics library for the Go language.
- Homepage: https://github.com/biogo/biogo
- Documentation: https://pkg.go.dev/gopkg.in/biogo/biogo.v1#section-documentation
- Licenses: BSD-3-Clause
- Latest release: v1.0.1 (published over 9 years ago)
- Last Synced: 2026-08-13T05:09:19.704Z (1 day ago)
- Versions: 2
- Dependent Packages: 0
- Dependent Repositories: 0
-
Rankings:
- Stargazers count: 1.845%
- Forks count: 2.17%
- Average: 5.09%
- Dependent packages count: 6.999%
- Dependent repos count: 9.346%
debian-11: golang-github-biogo-biogo
- Homepage: https://github.com/biogo/biogo
- Documentation: https://packages.debian.org/bullseye/golang-github-biogo-biogo
- Licenses:
- Latest release: 1.0.3-1 (published 6 months ago)
- Last Synced: 2026-03-13T14:34:58.525Z (5 months ago)
- Versions: 1
- Dependent Packages: 0
- Dependent Repositories: 0
-
Rankings:
- Dependent repos count: 0.0%
- Dependent packages count: 0.0%
- Average: 100%
debian-13: golang-github-biogo-biogo
- Homepage: https://github.com/biogo/biogo
- Documentation: https://packages.debian.org/trixie/golang-github-biogo-biogo
- Licenses: bsd-3-clause
- Latest release: 1.0.4-1 (published 6 months ago)
- Last Synced: 2026-07-24T20:45:32.172Z (21 days ago)
- Versions: 1
- Dependent Packages: 0
- Dependent Repositories: 0
-
Rankings:
- Dependent repos count: 0.0%
- Dependent packages count: 0.0%
- Average: 100%
guix: go-github-com-biogo-biogo
Bioinformatics library for Go
- Homepage: https://github.com/biogo/biogo
- Documentation: https://git.savannah.gnu.org/cgit/guix.git/tree/gnu/packages/bioinformatics.scm#n25218
- Licenses: bsd-3
- Latest release: 1.0.4 (published 5 months ago)
- Last Synced: 2026-04-07T15:01:53.668Z (4 months ago)
- Versions: 1
- Dependent Packages: 0
- Dependent Repositories: 0
-
Rankings:
- Dependent repos count: 0.0%
- Dependent packages count: 0.0%
- Average: 100%
debian-12: golang-github-biogo-biogo
- Homepage: https://github.com/biogo/biogo
- Documentation: https://packages.debian.org/bookworm/golang-github-biogo-biogo
- Licenses:
- Latest release: 1.0.4-1 (published 6 months ago)
- Last Synced: 2026-03-13T00:05:00.612Z (5 months ago)
- Versions: 1
- Dependent Packages: 0
- Dependent Repositories: 0
-
Rankings:
- Dependent repos count: 0.0%
- Dependent packages count: 0.0%
- Average: 100%
Dependencies
- github.com/biogo/graph v0.0.0-20150317020928-057c1989faed
- github.com/biogo/hts v1.1.0
- github.com/biogo/store v0.0.0-20200104231603-2c6ad937eb83
- gopkg.in/check.v1 v1.0.0-20190902080502-41f04d3bba15
- dmitri.shuralyov.com/gpu/mtl v0.0.0-20190408044501-666a987793e9
- github.com/BurntSushi/xgb v0.0.0-20160522181843-27f122750802
- github.com/biogo/boom v0.0.0-20150317015657-28119bc1ffc1
- github.com/biogo/graph v0.0.0-20150317020928-057c1989faed
- github.com/biogo/hts v1.1.0
- github.com/biogo/store v0.0.0-20200104231603-2c6ad937eb83
- github.com/go-gl/glfw/v3.3/glfw v0.0.0-20191125211704-12ad95a8df72
- github.com/kortschak/utter v0.0.0-20190412033250-50fe362e6560
- github.com/kr/pretty v0.2.0
- github.com/kr/pty v1.1.1
- github.com/kr/text v0.1.0
- github.com/ulikunitz/xz v0.5.6
- golang.org/x/crypto v0.0.0-20190308221718-c2843e01d9a2
- golang.org/x/crypto v0.0.0-20190510104115-cbcb75029529
- golang.org/x/exp v0.0.0-20190306152737-a1d7652674e8
- golang.org/x/exp v0.0.0-20200119233911-0405dc783f0a
- golang.org/x/image v0.0.0-20190227222117-0694c2d4d067
- golang.org/x/image v0.0.0-20190802002840-cff245a6509b
- golang.org/x/mobile v0.0.0-20190719004257-d2bd2a29d028
- golang.org/x/mod v0.1.0
- golang.org/x/net v0.0.0-20190404232315-eb5bcb51f2a3
- golang.org/x/net v0.0.0-20190620200207-3b0461eec859
- golang.org/x/sync v0.0.0-20190423024810-112230192c58
- golang.org/x/sys v0.0.0-20190215142949-d0b11bdaac8a
- golang.org/x/sys v0.0.0-20190312061237-fead79001313
- golang.org/x/sys v0.0.0-20190412213103-97732733099d
- golang.org/x/text v0.3.0
- golang.org/x/tools v0.0.0-20191012152004-8de300cfc20a
- golang.org/x/xerrors v0.0.0-20190717185122-a985d3407aa7
- gopkg.in/check.v1 v1.0.0-20190902080502-41f04d3bba15