iheatmapr

data-visualization heatmap interactive-visualizations peer-reviewed plotly r r-package rstats

Score: -Infinity

Last synced: about 3 hours ago
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Repository metadata:

Complex, interactive heatmaps in R

Host: GitHub
URL: https://github.com/ropensci/iheatmapr
Owner: ropensci
License: other
Created: 2017-03-16T17:44:27.000Z (over 9 years ago)
Default Branch: main
Last Pushed: 2024-08-13T10:13:32.000Z (almost 2 years ago)
Last Synced: 2026-02-10T12:08:57.311Z (4 months ago)
Topics: data-visualization, heatmap, interactive-visualizations, peer-reviewed, plotly, r, r-package, rstats
Language: R
Homepage: https://docs.ropensci.org/iheatmapr
Size: 21.1 MB
Stars: 270
Watchers: 22
Forks: 36
Open Issues: 52
Metadata Files:
- Readme: README.md
- Changelog: NEWS.md
- Contributing: CONTRIBUTING.md
- License: LICENSE
- Codemeta: codemeta.json

CodeMeta metadata:

@context: https://doi.org/10.5063/schema/codemeta-2.0
@type: SoftwareSourceCode
Identifier: iheatmapr
Description: Make complex, interactive heatmaps. 'iheatmapr' includes a modular system for iteratively building up complex heatmaps, as well as the iheatmap() function for making relatively standard heatmaps.
Name: iheatmapr: Interactive, Complex Heatmaps
Related link: https://docs.ropensci.org/iheatmapr
Code repository: https://github.com/ropensci/iheatmapr
Issue tracker: https://github.com/ropensci/iheatmapr/issues
License: https://spdx.org/licenses/MIT
Version: 0.7.0
Programming language:
- @type: ComputerLanguage
- Name: R
- Url: https://r-project.org
Runtime platform: R version 4.3.1 (2023-06-16)
Author:
- - @type: Person
  - Given name: Alicia
  - Family name: Schep
  - Email: aschep@gmail.com
  - @id: orcid.org/0000-0002-3915-0618
- - @type: Person
  - Given name: Sarah
  - Family name: Kummerfeld
  - Email: kummerfeld.sarah@gene.com
  - @id: orcid.org/0000-0002-0089-2358
Contributor:
- - @type: Person
  - Given name: Alex
  - Family name: Johnson
- - @type: Person
  - Given name: Étienne
  - Family name: Tétreault-Pinard
- - @type: Person
  - Given name: Mikola
  - Family name: Lysenko
- - @type: Person
  - Given name: Ricky
  - Family name: Reusser
- - @type: Person
  - Given name: Robert
  - Family name: Monfera
- - @type: Person
  - Given name: Nicolas
  - Family name: Riesco
- - @type: Person
  - Given name: Miklós
  - Family name: Tusz
- - @type: Person
  - Given name: Chelsea
  - Family name: Douglas
- - @type: Person
  - Given name: Ben
  - Family name: Postlethwaite
- - @type: Person
  - Given name: Chris
  - Family name: Parmer
- - @type: Person
  - Given name: Alex
  - Family name: Vados
- - @type: Person
  - Given name: Frederick
  - Family name: Boehm
Copyright holder:
- - @type: Organization
  - Name: Genentech
- - @type: Organization
  - Name: Plotly
Maintainer:
- - @type: Person
  - Given name: Alan
  - Family name: O'Callaghan
  - Email: alan.ocallaghan@outlook.com
Software suggestions:
- - @type: SoftwareApplication
  - Identifier: htmltools
  - Name: htmltools
  - Provider:
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    - @type: Organization
    - Name: Comprehensive R Archive Network (CRAN)
    - Url: https://cran.r-project.org
  - Same as: https://CRAN.R-project.org/package=htmltools
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  - Identifier: datasets
  - Name: datasets
- - @type: SoftwareApplication
  - Identifier: shiny
  - Name: shiny
  - Provider:
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    - Name: Comprehensive R Archive Network (CRAN)
    - Url: https://cran.r-project.org
  - Same as: https://CRAN.R-project.org/package=shiny
- - @type: SoftwareApplication
  - Identifier: testthat
  - Name: testthat
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  - Same as: https://CRAN.R-project.org/package=testthat
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- - @type: SoftwareApplication
  - Identifier: roxygen2
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  - Name: webshot
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    - @type: Organization
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  - Same as: https://CRAN.R-project.org/package=webshot
Software requirements:
- 1:
  - @type: SoftwareApplication
  - Identifier: R
  - Name: R
  - Version: >= 3.5.0
- 2:
  - @type: SoftwareApplication
  - Identifier: methods
  - Name: methods
- 3:
  - @type: SoftwareApplication
  - Identifier: utils
  - Name: utils
- 4:
  - @type: SoftwareApplication
  - Identifier: magrittr
  - Name: magrittr
  - Provider:
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    - @type: Organization
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    - Url: https://cran.r-project.org
  - Same as: https://CRAN.R-project.org/package=magrittr
- 5:
  - @type: SoftwareApplication
  - Identifier: stats
  - Name: stats
- 6:
  - @type: SoftwareApplication
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  - Name: ggdendro
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  - Same as: https://CRAN.R-project.org/package=ggdendro
- 7:
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  - Name: fastcluster
  - Provider:
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    - @type: Organization
    - Name: Comprehensive R Archive Network (CRAN)
    - Url: https://cran.r-project.org
  - Same as: https://CRAN.R-project.org/package=fastcluster
- 8:
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  - Same as: https://CRAN.R-project.org/package=RColorBrewer
- 9:
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  - Name: htmlwidgets
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  - Same as: https://CRAN.R-project.org/package=htmlwidgets
- 10:
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- 11:
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  - Name: scales
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    - @type: Organization
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    - Url: https://cran.r-project.org
  - Same as: https://CRAN.R-project.org/package=scales
- 12:
  - @type: SoftwareApplication
  - Identifier: knitr
  - Name: knitr
  - Provider:
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    - @type: Organization
    - Name: Comprehensive R Archive Network (CRAN)
    - Url: https://cran.r-project.org
  - Same as: https://CRAN.R-project.org/package=knitr
- 13:
  - @type: SoftwareApplication
  - Identifier: tools
  - Name: tools
- System requirements:
Application category: Visualization
Is part of: https://ropensci.org
Keywords:
- heatmap
- plotly
- r
- interactive-visualizations
- data-visualization
- htmlwidgets
- rstats
- r-package
- peer-reviewed
File size: 22659.166KB
Citation:
- - @type: ScholarlyArticle
  - Date published: 2017
  - Author:
    - - @type: Person
      - Given name:
        Alicia
        N
      - Family name: Schep
    - - @type: Person
      - Given name:
        Sarah
        K
      - Family name: Kummerfeld
  - Name: iheatmapr: Interactive complex heatmaps in R
  - Identifier: 10.21105/joss.00359
  - Url: http://dx.doi.org/10.21105/joss.00359
  - @id: https://doi.org/10.21105/joss.00359
  - Same as: https://doi.org/10.21105/joss.00359
  - Is part of:
    - @type: PublicationIssue
    - Date published: 2017
    - Is part of:
      - @type:
        PublicationVolume
        Periodical
      - Name: Journal of Open Source Software
Release notes: https://github.com/ropensci/iheatmapr/blob/master/NEWS.md
Readme: https://github.com/ropensci/iheatmapr/blob/main/README.md
Cont integration: https://github.com/ropensci/iheatmapr/actions?query=workflow%3AR-CMD-check
Review:
- @type: Review
- Url: https://github.com/ropensci/software-review/issues/107
- Provider: https://ropensci.org

Owner metadata:

Name: rOpenSci
Login: ropensci
Email: info@ropensci.org
Kind: organization
Description:
Website: https://ropensci.org/
Location: Berkeley, CA
Twitter: rOpenSci
Company:
Icon url: https://avatars.githubusercontent.com/u/1200269?v=4
Repositories: 307
Last Synced at: 2023-03-10T20:30:59.242Z
Profile URL: https://github.com/ropensci

GitHub Events

Total

Issue comment event: 1
Watch event: 2
Total: 3

Last Year

Issue comment event: 1
Watch event: 2
Total: 3

Committers metadata

Last synced: 4 months ago

Total Commits: 152
Total Committers: 12
Avg Commits per committer: 12.667
Development Distribution Score (DDS): 0.217

Commits in past year: 0
Committers in past year: 0
Avg Commits per committer in past year: 0.0
Development Distribution Score (DDS) in past year: 0.0

Name	Email	Commits
AliciaSchep	a**p@g**m	119
Alicia	a**p@s**u	16
Frederick Boehm	f**m@g**m	6
Alan O'Callaghan	a**n@o**m	3
oristaszewski	1****i	1
Maëlle Salmon	m**n@y**e	1
Marcel Schilling	m**g@m**e	1
Karthik Ram	k**m@g**m	1
Jeroen Ooms	j**s@g**m	1
Jean V. Adams	J****s	1
Grace Li	g**8@b**u	1
Ahmed Mohamed	m**d@k**p	1

Issue and Pull Request metadata

Last synced: 5 months ago

Total issues: 83
Total pull requests: 29
Average time to close issues: 3 months
Average time to close pull requests: 17 days
Total issue authors: 48
Total pull request authors: 11
Average comments per issue: 2.23
Average comments per pull request: 1.21
Merged pull request: 23
Bot issues: 0
Bot pull requests: 0

Past year issues: 1
Past year pull requests: 0
Past year average time to close issues: N/A
Past year average time to close pull requests: N/A
Past year issue authors: 1
Past year pull request authors: 0
Past year average comments per issue: 1.0
Past year average comments per pull request: 0
Past year merged pull request: 0
Past year bot issues: 0
Past year bot pull requests: 0

More stats: https://issues.ecosyste.ms/repositories/lookup?url=https://github.com/ropensci/iheatmapr

Top Issue Authors

AliciaSchep (8)
dasiav7 (7)
mschilli87 (5)
alpreyes (3)
halhen (3)
IgnatiusPang (3)
daattali (3)
lucaz88 (2)
josruirod (2)
rfenouil (2)
srsankhe (2)
romert01 (2)
ahmohamed (2)
shreyagupta0909 (2)
alanocallaghan (2)

Top Pull Request Authors

AliciaSchep (9)
alanocallaghan (5)
maelle (4)
fboehm (3)
ahmohamed (2)
oristaszewski (1)
mschilli87 (1)
graceli8 (1)
JVAdams (1)
jeroen (1)
karthik (1)

Top Issue Labels

question (22)
enhancement (15)
bug (10)
maybe-fixed (2)

Top Pull Request Labels

Package metadata

Total packages: 1
Total downloads: unknown
Total dependent packages: 0
Total dependent repositories: 0
Total versions: 5

proxy.golang.org: github.com/ropensci/iheatmapr

Homepage:
Documentation: https://pkg.go.dev/github.com/ropensci/iheatmapr#section-documentation
Licenses: other
Latest release: v0.5.0 (published almost 6 years ago)
Last Synced: 2026-05-21T10:03:12.468Z (about 1 month ago)
Versions: 5
Dependent Packages: 0
Dependent Repositories: 0
Rankings:
- Dependent packages count: 5.389%
- Average: 5.57%
- Dependent repos count: 5.75%

Dependencies

DESCRIPTION cran

R >= 3.2.0 depends
RColorBrewer * imports
fastcluster * imports
ggdendro * imports
htmlwidgets * imports
jsonlite * imports
knitr * imports
magrittr * imports
methods * imports
scales * imports
stats * imports
tools * imports
utils * imports
covr * suggests
datasets * suggests
htmltools * suggests
reshape2 * suggests
rmarkdown * suggests
roxygen2 * suggests
shiny * suggests
testthat * suggests
webshot * suggests

.github/workflows/check-standard.yaml actions

actions/checkout v3 composite
r-lib/actions/check-r-package v2 composite
r-lib/actions/setup-pandoc v2 composite
r-lib/actions/setup-r v2 composite
r-lib/actions/setup-r-dependencies v2 composite

.github/workflows/test-coverage.yaml actions

actions/checkout v3 composite
r-lib/actions/setup-r v2 composite
r-lib/actions/setup-r-dependencies v2 composite

ecosyste.ms

Data

Tools

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Applications

Experiments

Summary