JOSS: https://github.com/edawson/gfakluge
genomics gfa graph-representation parsing
Score: 6.90875477931522
Last synced: about 6 hours ago
JSON representation
Repository metadata:
A C++ library and utilities for manipulating the Graphical Fragment Assembly format.
- Host: GitHub
- URL: https://github.com/edawson/gfakluge
- Owner: edawson
- License: mit
- Created: 2015-11-30T16:40:53.000Z (over 10 years ago)
- Default Branch: master
- Last Pushed: 2022-05-17T21:07:45.000Z (about 4 years ago)
- Last Synced: 2026-06-05T16:03:40.904Z (18 days ago)
- Topics: genomics, gfa, graph-representation, parsing
- Language: C++
- Homepage: http://edawson.github.io/gfakluge/
- Size: 1.87 MB
- Stars: 55
- Watchers: 3
- Forks: 20
- Open Issues: 22
-
Metadata Files:
- Readme: README.md
- License: LICENSE.md
- Codemeta: codemeta.json
CodeMeta metadata:
- @context: https://raw.githubusercontent.com/codemeta/codemeta/master/codemeta.jsonld
- @type: Code
- Author:
- @id: 0000-0001-5448-1653
- @type: Person
- Email: eric.t.dawson@gmail.com
- Name: Eric T. Dawson
- Affiliation: Department of Genetics, University of Cambridge; Division of Cancer Epidemiology and Genetics, National Cancer Institute, National Institutes of Health; Wellcome Sanger Institute
- @id: 0000-0002-9130-1006
- @type: Person
- Email: rd109@cam.ac.uk
- Name: Richard Durbin
- Affiliation: Department of Genetics, University of Cambridge; Wellcome Sanger Institute
- Identifier: doi.org/10.5281/zenodo.1434136
- Code repository: https://github.com/edawson/gfakluge
- Date published: 2018-09-24
- Date modified: 2018-09-24
- Date created: 2018-09-24
- Description: A C++ library and utilities for manipulating the Graphical Fragment Assembly format.
- Keywords: genome assembly, GFA, C++, bioinformatics, FASTA
- License: MIT
- Title: GFAKluge: A C++ library and command line utilities for the Graphical Fragment Assembly formats
- Version: 1.0.0
Owner metadata:
- Name: Eric T. Dawson
- Login: edawson
- Email:
- Kind: user
- Description: Bioinformatics Scientist (Genomics / AI) @nvidia
- Website: www.erictdawson.com
- Location: Working From Home
- Twitter: erictdawson
- Company: @nvidia
- Icon url: https://avatars.githubusercontent.com/u/2595153?u=ad62be274c6b6d28154ec005ed166bdd824f88b6&v=4
- Repositories: 25
- Last Synced at: 2023-04-04T14:12:18.464Z
- Profile URL: https://github.com/edawson
GitHub Events
Total
- Watch event: 5
- Total: 5
Last Year
- Watch event: 2
- Total: 2
Committers metadata
Last synced: 3 days ago
Total Commits: 350
Total Committers: 13
Avg Commits per committer: 26.923
Development Distribution Score (DDS): 0.109
Commits in past year: 0
Committers in past year: 0
Avg Commits per committer in past year: 0.0
Development Distribution Score (DDS) in past year: 0.0
| Name | Commits | |
|---|---|---|
| Eric T. Dawson | e****n@g****m | 312 |
| Eric T Dawson | e****n@u****u | 9 |
| Camille Scott | c****w@g****m | 5 |
| Anton Korobeynikov | a****n@k****o | 5 |
| Ali Ghaffaari | a****i@g****m | 4 |
| LukasW94 | l****t@u****e | 3 |
| Erik Garrison | e****n@g****m | 3 |
| Adam Novak | a****k@s****u | 3 |
| Shaun Jackman | s****n@g****m | 2 |
| Michael R. Crusoe | 1****c | 1 |
| Marco van Zwetselaar | i****o@z****t | 1 |
| Hassan Nikaein | n****n@g****m | 1 |
| Dr. K. D. Murray | 1****9 | 1 |
Issue and Pull Request metadata
Last synced: 10 months ago
Total issues: 43
Total pull requests: 30
Average time to close issues: 2 months
Average time to close pull requests: 30 days
Total issue authors: 13
Total pull request authors: 13
Average comments per issue: 2.42
Average comments per pull request: 0.77
Merged pull request: 22
Bot issues: 0
Bot pull requests: 0
Past year issues: 1
Past year pull requests: 0
Past year average time to close issues: N/A
Past year average time to close pull requests: N/A
Past year issue authors: 1
Past year pull request authors: 0
Past year average comments per issue: 0.0
Past year average comments per pull request: 0
Past year merged pull request: 0
Past year bot issues: 0
Past year bot pull requests: 0
Top Issue Authors
- edawson (19)
- sjackman (12)
- LukasW94 (2)
- JuFengWang (1)
- cartoonist (1)
- 8banzhuan (1)
- adamnovak (1)
- AndreaGuarracino (1)
- jeizenga (1)
- uveyikk (1)
- tetron (1)
- Zethson (1)
- ekg (1)
Top Pull Request Authors
- edawson (10)
- adamnovak (4)
- cartoonist (3)
- sjackman (3)
- jeizenga (2)
- mr-c (1)
- aafshinfard (1)
- zwets (1)
- kdm9 (1)
- camillescott (1)
- ekg (1)
- hnikaein (1)
- asl (1)
Top Issue Labels
- enhancement (8)
- Feature Request (3)
- docs (2)
- bug (2)