JOSS: https://github.com/NBISweden/GUESSmyLT
guesser library orientation rna-seq standed
Score: 8.367532416861831
Last synced: about 6 hours ago
JSON representation
Repository metadata:
An efficient way to guess the library type of your RNA-Seq data.
- Host: GitHub
- URL: https://github.com/NBISweden/GUESSmyLT
- Owner: NBISweden
- License: gpl-3.0
- Created: 2018-12-13T13:27:52.000Z (over 7 years ago)
- Default Branch: master
- Last Pushed: 2022-10-11T07:23:19.000Z (over 3 years ago)
- Last Synced: 2025-12-07T01:44:53.439Z (7 months ago)
- Topics: guesser, library, orientation, rna-seq, standed
- Language: Python
- Size: 28.3 MB
- Stars: 33
- Watchers: 34
- Forks: 4
- Open Issues: 8
-
Metadata Files:
- Readme: README.md
- Contributing: CONTRIBUTING.md
- License: LICENSE
Owner metadata:
- Name: NBIS - National Bioinformatics Infrastructure Sweden
- Login: NBISweden
- Email:
- Kind: organization
- Description: NBIS is a distributed national bioinformatics infrastructure, supporting life sciences in Sweden.
- Website: https://nbis.se
- Location: Sweden
- Twitter: NBISwe
- Company:
- Icon url: https://avatars.githubusercontent.com/u/1224807?v=4
- Repositories: 237
- Last Synced at: 2023-05-27T15:40:14.650Z
- Profile URL: https://github.com/NBISweden
GitHub Events
Total
- Watch event: 3
- Total: 3
Last Year
- Watch event: 2
- Total: 2
Committers metadata
Last synced: 6 months ago
Total Commits: 87
Total Committers: 5
Avg Commits per committer: 17.4
Development Distribution Score (DDS): 0.241
Commits in past year: 0
Committers in past year: 0
Avg Commits per committer in past year: 0.0
Development Distribution Score (DDS) in past year: 0.0
| Name | Commits | |
|---|---|---|
| Jacques Dainat | j****t@n****e | 66 |
| Jacques Dainat | j****t@b****e | 12 |
| Hampus Olin | h****n@o****m | 5 |
| nanjiangshu | n****u@g****m | 3 |
| Jacques Dainat | j****s@r****e | 1 |
Issue and Pull Request metadata
Last synced: 8 months ago
Total issues: 23
Total pull requests: 1
Average time to close issues: 2 months
Average time to close pull requests: about 17 hours
Total issue authors: 10
Total pull request authors: 1
Average comments per issue: 2.7
Average comments per pull request: 0.0
Merged pull request: 1
Bot issues: 0
Bot pull requests: 0
Past year issues: 0
Past year pull requests: 0
Past year average time to close issues: N/A
Past year average time to close pull requests: N/A
Past year issue authors: 0
Past year pull request authors: 0
Past year average comments per issue: 0
Past year average comments per pull request: 0
Past year merged pull request: 0
Past year bot issues: 0
Past year bot pull requests: 0
Top Issue Authors
- Juke34 (10)
- mistrm82 (2)
- Homap (2)
- papelypluma (2)
- Shellfishgene (2)
- jpfeil (1)
- julienlag (1)
- yifangt (1)
- LehmannN (1)
- liaguiro (1)
Top Pull Request Authors
- Juke34 (1)
Top Issue Labels
- enhancement (6)
Top Pull Request Labels
Package metadata
- Total packages: 1
-
Total downloads:
- pypi: 18 last-month
- Total dependent packages: 0
- Total dependent repositories: 1
- Total versions: 6
- Total maintainers: 2
pypi.org: guessmylt
An efficient way to guess the library type of RNA-reads
- Homepage: https://github.com/NBISweden/GUESSmyLT
- Documentation: https://guessmylt.readthedocs.io/
- Licenses: GPL-3.0
- Latest release: 0.2.5 (published about 7 years ago)
- Last Synced: 2025-12-14T03:16:08.155Z (6 months ago)
- Versions: 6
- Dependent Packages: 0
- Dependent Repositories: 1
- Downloads: 18 Last month
-
Rankings:
- Dependent packages count: 10.082%
- Stargazers count: 11.863%
- Forks count: 15.318%
- Average: 18.58%
- Dependent repos count: 21.62%
- Downloads: 34.018%
- Maintainers (2)
Dependencies
- bcbio-gff ==0.6.4
- biopython ==1.67
- pysam >=0.13.0
- snakemake ==5.4.