JOSS: https://github.com/jbloomlab/alignparse
Score: 10.168310330841827
Last synced: about 12 hours ago
JSON representation
Repository metadata:
Align sequences and then parse features.
- Host: GitHub
- URL: https://github.com/jbloomlab/alignparse
- Owner: jbloomlab
- License: other
- Created: 2019-06-27T17:59:31.000Z (almost 7 years ago)
- Default Branch: master
- Last Pushed: 2025-10-24T15:04:46.000Z (8 months ago)
- Last Synced: 2026-04-24T18:12:28.181Z (about 2 months ago)
- Language: Jupyter Notebook
- Size: 8.22 MB
- Stars: 17
- Watchers: 5
- Forks: 10
- Open Issues: 1
-
Metadata Files:
- Readme: README.rst
- Changelog: CHANGELOG.rst
- Contributing: CONTRIBUTING.rst
- License: LICENSE.txt
Owner metadata:
- Name: jbloomlab
- Login: jbloomlab
- Email: jbloom@fredhutch.org
- Kind: organization
- Description: Jesse Bloom's lab GitHub account
- Website: http://research.fhcrc.org/bloom/en.html
- Location: Seattle, WA, USA
- Twitter:
- Company:
- Icon url: https://avatars.githubusercontent.com/u/17679492?v=4
- Repositories: 75
- Last Synced at: 2023-03-24T23:25:27.197Z
- Profile URL: https://github.com/jbloomlab
GitHub Events
Total
- Create event: 4
- Delete event: 1
- Fork event: 1
- Issue comment event: 2
- Issues event: 1
- Pull request event: 3
- Push event: 4
- Release event: 2
- Total: 18
Last Year
- Create event: 1
- Pull request event: 1
- Total: 2
Committers metadata
Last synced: about 2 months ago
Total Commits: 298
Total Committers: 8
Avg Commits per committer: 37.25
Development Distribution Score (DDS): 0.46
Commits in past year: 1
Committers in past year: 1
Avg Commits per committer in past year: 1.0
Development Distribution Score (DDS) in past year: 0.0
| Name | Commits | |
|---|---|---|
| jbloom | j****m@f****g | 161 |
| Kate Dusenbury | k****y@g****m | 114 |
| Alan Rubin | a****n@w****u | 11 |
| Bernadeta Dadonaite | b****e@g****m | 8 |
| jianfcpku | 4****u | 1 |
| Kate Dusenbury | k****y | 1 |
| Arfon Smith | a****n | 1 |
| Andrew Butler | a****r | 1 |
Issue and Pull Request metadata
Last synced: 8 months ago
Total issues: 37
Total pull requests: 74
Average time to close issues: 27 days
Average time to close pull requests: 19 days
Total issue authors: 12
Total pull request authors: 9
Average comments per issue: 1.76
Average comments per pull request: 0.89
Merged pull request: 71
Bot issues: 0
Bot pull requests: 0
Past year issues: 2
Past year pull requests: 4
Past year average time to close issues: 3 days
Past year average time to close pull requests: about 3 hours
Past year issue authors: 2
Past year pull request authors: 2
Past year average comments per issue: 1.0
Past year average comments per pull request: 0.5
Past year merged pull request: 3
Past year bot issues: 0
Past year bot pull requests: 0
Top Issue Authors
- jbloom (17)
- afrubin (5)
- khdcrawford (4)
- greenkidneybean (2)
- xguse (2)
- jianfcpku (1)
- fc-jian (1)
- krdav (1)
- Jayaos (1)
- bede (1)
- Bernadetadad (1)
- cdebuck (1)
Top Pull Request Authors
- jbloom (51)
- khdcrawford (14)
- cdebuck (2)
- jianfcpku (2)
- andrewwbutler (1)
- afrubin (1)
- fc-jian (1)
- arfon (1)
- Bernadetadad (1)
Top Issue Labels
Top Pull Request Labels
Package metadata
- Total packages: 1
-
Total downloads:
- pypi: 177 last-month
- Total dependent packages: 0
- Total dependent repositories: 3
- Total versions: 25
- Total maintainers: 1
pypi.org: alignparse
Align sequences and then parse features.
- Homepage: https://github.com/jbloomlab/alignparse
- Documentation: https://alignparse.readthedocs.io/
- Licenses: GPLv3
- Latest release: 0.8.0 (published 8 months ago)
- Last Synced: 2026-05-04T23:05:23.286Z (about 2 months ago)
- Versions: 25
- Dependent Packages: 0
- Dependent Repositories: 3
- Downloads: 177 Last month
-
Rankings:
- Dependent repos count: 8.987%
- Dependent packages count: 10.032%
- Forks count: 11.408%
- Average: 14.412%
- Stargazers count: 14.836%
- Downloads: 26.795%
- Maintainers (1)
Dependencies
- ipykernel >=5.1.0
- matplotlib >=3.0.2
- nbsphinx >=0.4.2
- nbsphinx-link >=1.2.0
- pandoc >=2.7.3
- sphinx >=2.0
- sphinx-argparse >=0.2.5
- sphinx_gallery >=0.3.1
- dms_variants >=0.8.6
- biopython >=1.73
- dna_features_viewer >=1.0.0
- matplotlib >=3.0.0
- numpy >=1.17
- packaging *
- pandas >=0.25.1
- pathos >=0.2.4
- plotnine >=0.6
- pysam >=0.14
- pyyaml >=5.1.1
- regex >=2.5.33
- scipy >=1.2
- black * test
- dms_variants * test
- flake8 * test
- flake8-bugbear * test
- flake8-builtins * test
- flake8-comprehensions * test
- flake8-docstrings * test
- flake8-import-order * test
- flake8-print * test
- flake8-rst-docstrings * test
- nbval * test
- pytest * test