JOSS: https://github.com/drostlab/LTRpred
diversification evolution genome ltr ltr-retrotransposons ltr-transposons pipeline
Score: 5.030437921392435
Last synced: about 17 hours ago
JSON representation
Repository metadata:
De novo annotation of young retrotransposons
- Host: GitHub
- URL: https://github.com/drostlab/LTRpred
- Owner: drostlab
- License: gpl-2.0
- Created: 2016-01-09T11:31:59.000Z (over 10 years ago)
- Default Branch: master
- Last Pushed: 2026-04-24T10:30:08.000Z (4 months ago)
- Last Synced: 2026-08-05T23:34:21.673Z (17 days ago)
- Topics: diversification, evolution, genome, ltr, ltr-retrotransposons, ltr-transposons, pipeline
- Language: R
- Homepage: https://drostlab.github.io/LTRpred/
- Size: 8.27 MB
- Stars: 46
- Watchers: 4
- Forks: 10
- Open Issues: 5
-
Metadata Files:
- Readme: README.md
- License: LICENSE
Owner metadata:
- Name: Drost Laboratory - Digital Biology Research Group
- Login: drostlab
- Email:
- Kind: organization
- Description: School of Life Sciences, University of Dundee
- Website: https://drostlab.com/
- Location: United Kingdom
- Twitter:
- Company:
- Icon url: https://avatars.githubusercontent.com/u/63910447?v=4
- Repositories: 22
- Last Synced at: 2024-11-02T16:42:11.432Z
- Profile URL: https://github.com/drostlab
GitHub Events
Total
- Member event: 5
- Push event: 1
- Total: 6
Last Year
- Push event: 1
- Total: 1
Committers metadata
Last synced: 3 days ago
Total Commits: 1,094
Total Committers: 3
Avg Commits per committer: 364.667
Development Distribution Score (DDS): 0.003
Commits in past year: 2
Committers in past year: 1
Avg Commits per committer in past year: 2.0
Development Distribution Score (DDS) in past year: 0.0
| Name | Commits | |
|---|---|---|
| HajkD | h****t@g****m | 1091 |
| Hajk-Georg Drost | h****t@a****l | 2 |
| Arfon Smith | a****n | 1 |
Issue and Pull Request metadata
Last synced: 1 day ago
Total issues: 0
Total pull requests: 0
Average time to close issues: N/A
Average time to close pull requests: N/A
Total issue authors: 0
Total pull request authors: 0
Average comments per issue: 0
Average comments per pull request: 0
Merged pull request: 0
Bot issues: 0
Bot pull requests: 0
Past year issues: 0
Past year pull requests: 0
Past year average time to close issues: N/A
Past year average time to close pull requests: N/A
Past year issue authors: 0
Past year pull request authors: 0
Past year average comments per issue: 0
Past year average comments per pull request: 0
Past year merged pull request: 0
Past year bot issues: 0
Past year bot pull requests: 0
Top Issue Authors
Top Pull Request Authors
Top Issue Labels
Top Pull Request Labels
Dependencies
- R >= 3.1.1 depends
- BSDA * imports
- Biostrings * imports
- GenomeInfoDb * imports
- GenomicRanges * imports
- IRanges * imports
- R.utils * imports
- RColorBrewer * imports
- ape * imports
- biomartr >= 0.5.1 imports
- downloader * imports
- dplyr >= 0.3.0.2 imports
- ggplot2 * imports
- ggrepel * imports
- gridExtra * imports
- magrittr * imports
- methods * imports
- parallel >= 3.0.2 imports
- readr * imports
- reshape2 * imports
- scales * imports
- stringr >= 0.6.2 imports
- tibble * imports
- amap * suggests
- devtools >= 1.6.1 suggests
- ggbio * suggests
- ggsci * suggests
- knitr >= 1.6 suggests
- rmarkdown >= 0.3.3 suggests
- roxygen2 * suggests
- testthat >= 0.9.1 suggests