JOSS: https://github.com/barricklab/ostir
bioengineering rna-structure synthetic-biology
Score: 11.29103113305645
Last synced: about 23 hours ago
JSON representation
Repository metadata:
Software for predicting translation initiation rates in bacteria
- Host: GitHub
- URL: https://github.com/barricklab/ostir
- Owner: barricklab
- License: gpl-3.0
- Created: 2019-05-21T19:54:43.000Z (about 7 years ago)
- Default Branch: master
- Last Pushed: 2025-07-30T19:23:03.000Z (11 months ago)
- Last Synced: 2026-06-10T18:03:30.212Z (12 days ago)
- Topics: bioengineering, rna-structure, synthetic-biology
- Language: Python
- Homepage:
- Size: 6.85 MB
- Stars: 33
- Watchers: 3
- Forks: 9
- Open Issues: 3
-
Metadata Files:
- Readme: README.md
- License: LICENSE
- Citation: CITATION.cff
- Zenodo: .zenodo.json
Owner metadata:
- Name: Barrick Lab
- Login: barricklab
- Email:
- Kind: organization
- Description: Barrick Lab at the University of Texas at Austin
- Website: http://barricklab.org
- Location: Austin, TX
- Twitter:
- Company:
- Icon url: https://avatars.githubusercontent.com/u/11457754?v=4
- Repositories: 15
- Last Synced at: 2023-02-28T18:40:31.775Z
- Profile URL: https://github.com/barricklab
GitHub Events
Total
- Create event: 2
- Issue comment event: 7
- Pull request event: 2
- Push event: 15
- Release event: 1
- Watch event: 9
- Total: 36
Last Year
- Issue comment event: 5
- Push event: 2
- Watch event: 2
- Total: 9
Committers metadata
Last synced: 4 days ago
Total Commits: 159
Total Committers: 5
Avg Commits per committer: 31.8
Development Distribution Score (DDS): 0.314
Commits in past year: 2
Committers in past year: 1
Avg Commits per committer in past year: 2.0
Development Distribution Score (DDS) in past year: 0.0
| Name | Commits | |
|---|---|---|
| Cameron | c****s@u****u | 109 |
| Jeffrey Barrick | j****k@g****m | 46 |
| ajlukasiewicz | a****z@u****u | 2 |
| Yiduo Wang | 6****2 | 1 |
| Luilver Garcés Briñas | l****r@g****m | 1 |
Issue and Pull Request metadata
Last synced: about 1 month ago
Total issues: 10
Total pull requests: 8
Average time to close issues: 3 months
Average time to close pull requests: 9 days
Total issue authors: 7
Total pull request authors: 4
Average comments per issue: 1.4
Average comments per pull request: 0.63
Merged pull request: 7
Bot issues: 0
Bot pull requests: 0
Past year issues: 1
Past year pull requests: 0
Past year average time to close issues: about 19 hours
Past year average time to close pull requests: N/A
Past year issue authors: 1
Past year pull request authors: 0
Past year average comments per issue: 2.0
Past year average comments per pull request: 0
Past year merged pull request: 0
Past year bot issues: 0
Past year bot pull requests: 0
Top Issue Authors
- jeffreybarrick (3)
- jhahnfeld (2)
- croots (1)
- luilver (1)
- cclough (1)
- biseiohkawara (1)
- enguangfu (1)
Top Pull Request Authors
- croots (3)
- yiduo-wang-32 (2)
- luilver (2)
- ajlukasiewicz (1)
Top Issue Labels
- enhancement (2)
- help wanted (1)
Top Pull Request Labels
Package metadata
- Total packages: 3
-
Total downloads:
- pypi: 441 last-month
- Total dependent packages: 1 (may contain duplicates)
- Total dependent repositories: 1 (may contain duplicates)
- Total versions: 14
- Total maintainers: 2
pypi.org: ostir50
Open Source Transcription Initiation Rates
- Homepage: https://github.com/barricklab/ostir
- Documentation: https://ostir50.readthedocs.io/
- Licenses: GNU General Public License v3 or later (GPLv3+)
- Latest release: 1.0.6 (published almost 4 years ago)
- Last Synced: 2026-06-18T22:00:47.876Z (4 days ago)
- Versions: 1
- Dependent Packages: 0
- Dependent Repositories: 0
- Downloads: 0
-
Rankings:
- Dependent packages count: 4.842%
- Dependent repos count: 6.331%
- Forks count: 14.427%
- Stargazers count: 18.23%
- Average: 18.942%
- Downloads: 50.881%
pypi.org: ostir-50
Open Source Transcription Initiation Rates
- Homepage: https://github.com/barricklab/ostir
- Documentation: https://ostir-50.readthedocs.io/
- Licenses: GNU General Public License v3 or later (GPLv3+)
- Latest release: 1.0.6 (published almost 4 years ago)
- Last Synced: 2026-06-18T22:00:49.066Z (4 days ago)
- Versions: 1
- Dependent Packages: 0
- Dependent Repositories: 0
- Downloads: 0
-
Rankings:
- Dependent packages count: 4.842%
- Dependent repos count: 6.331%
- Forks count: 14.427%
- Stargazers count: 18.23%
- Average: 18.942%
- Downloads: 50.881%
pypi.org: ostir
Open Source Transcription Initiation Rates
- Homepage: https://github.com/barricklab/ostir
- Documentation: https://ostir.readthedocs.io/
- Licenses: GNU General Public License v3 or later (GPLv3+)
- Latest release: 1.1.3 (published over 1 year ago)
- Last Synced: 2026-06-18T22:00:48.810Z (4 days ago)
- Versions: 12
- Dependent Packages: 1
- Dependent Repositories: 1
- Downloads: 441 Last month
-
Rankings:
- Dependent packages count: 10.109%
- Forks count: 15.369%
- Stargazers count: 18.526%
- Average: 18.99%
- Dependent repos count: 21.559%
- Downloads: 29.386%
- Maintainers (2)
Dependencies
- actions/checkout v2 composite
- numpy *
- actions/checkout v3 composite
- actions/setup-python v3 composite
- pypa/gh-action-pypi-publish 27b31702a0e7fc50959f5ad993c78deac1bdfc29 composite