JOSS: https://github.com/lorenzo-rovigatti/oxDNA
dna physics-simulation simulation
Score: 8.132118772955808
Last synced: about 10 hours ago
JSON representation
Repository metadata:
The standalone code to simulate the oxDNA/oxRNA models, now equipped with Python bindings and the oxDNA_analysis_tools suite
- Host: GitHub
- URL: https://github.com/lorenzo-rovigatti/oxDNA
- Owner: lorenzo-rovigatti
- License: gpl-3.0
- Created: 2019-09-17T14:41:57.000Z (almost 7 years ago)
- Default Branch: master
- Last Pushed: 2026-06-10T08:35:36.000Z (12 days ago)
- Last Synced: 2026-06-16T21:01:01.753Z (6 days ago)
- Topics: dna, physics-simulation, simulation
- Language: C++
- Homepage: https://lorenzo-rovigatti.github.io/oxDNA/
- Size: 51.9 MB
- Stars: 70
- Watchers: 6
- Forks: 46
- Open Issues: 11
-
Metadata Files:
- Readme: README.md
- Changelog: CHANGELOG
- Contributing: contributing.md
- License: LICENSE
Owner metadata:
- Name: Lorenzo Rovigatti
- Login: lorenzo-rovigatti
- Email:
- Kind: user
- Description: Associate professor of computational physics
- Website: http://www.roma1.infn.it/~rovigatl/
- Location: Rome
- Twitter:
- Company: Sapienza University of Rome
- Icon url: https://avatars.githubusercontent.com/u/68116?u=f9dc49ee1fa44e0b94ceef7389d67664f4599695&v=4
- Repositories: 49
- Last Synced at: 2023-04-14T10:25:17.741Z
- Profile URL: https://github.com/lorenzo-rovigatti
GitHub Events
Total
- Create event: 6
- Delete event: 8
- Fork event: 13
- Issue comment event: 109
- Issues event: 39
- Pull request event: 36
- Pull request review comment event: 12
- Pull request review event: 15
- Push event: 125
- Release event: 1
- Watch event: 19
- Total: 383
Last Year
- Create event: 2
- Delete event: 5
- Fork event: 6
- Issue comment event: 28
- Issues event: 6
- Pull request event: 11
- Pull request review comment event: 11
- Pull request review event: 13
- Push event: 71
- Watch event: 7
- Total: 160
Committers metadata
Last synced: 3 days ago
Total Commits: 1,760
Total Committers: 42
Avg Commits per committer: 41.905
Development Distribution Score (DDS): 0.465
Commits in past year: 136
Committers in past year: 9
Avg Commits per committer in past year: 15.111
Development Distribution Score (DDS) in past year: 0.419
| Name | Commits | |
|---|---|---|
| Lorenzo Rovigatti | l****i@g****m | 942 |
| Erik Poppleton | r****n@g****m | 259 |
| flavioromano | 3****o | 127 |
| Ferdinando Randisi | f****i@g****m | 87 |
| Eryk Ratajczyk | 0****k@g****m | 62 |
| tgfrancesco | 5****o | 48 |
| sulcp | 3****p | 38 |
| bsnodin | b****n@8****6 | 34 |
| fochtman | f****n@8****6 | 19 |
| Erik Poppleton | e****n@b****e | 18 |
| zoombya | p****b@g****m | 17 |
| Debesh-XPS | d****l@h****m | 14 |
| herbinaberry | h****y@8****6 | 11 |
| mc2engel | m****l@8****6 | 9 |
| francescotg | f****g@n***** | 7 |
| Erik Poppleton | p****k@r****e | 6 |
| sarahwork | s****k@S****l | 5 |
| Erik Poppleton | p****k@r****e | 5 |
| Josh Evans | j****l@g****m | 5 |
| Erik Poppleton | e****n@b****l | 4 |
| VSlivinskis | 1****s | 4 |
| sarahhaggenmueller-tum | s****r@t****e | 4 |
| Constantine Evans | c****t@c****u | 4 |
| Subhajit Roy | 4****o | 4 |
| elija feigl | e****l | 3 |
| henjacob | h****b@8****6 | 3 |
| dependabot[bot] | 4****] | 2 |
| Luca Monari | w****7@u****e | 2 |
| lorenzo | l****o@c****9 | 2 |
| cmatek | c****k@8****6 | 2 |
| and 12 more... | ||
Issue and Pull Request metadata
Last synced: 12 days ago
Total issues: 70
Total pull requests: 68
Average time to close issues: about 1 month
Average time to close pull requests: 6 days
Total issue authors: 42
Total pull request authors: 16
Average comments per issue: 3.41
Average comments per pull request: 1.38
Merged pull request: 53
Bot issues: 0
Bot pull requests: 5
Past year issues: 5
Past year pull requests: 12
Past year average time to close issues: about 14 hours
Past year average time to close pull requests: 3 days
Past year issue authors: 5
Past year pull request authors: 5
Past year average comments per issue: 5.0
Past year average comments per pull request: 0.58
Past year merged pull request: 8
Past year bot issues: 0
Past year bot pull requests: 0
Top Issue Authors
- JeDeveloper (6)
- alec-cook (5)
- lorenzo-rovigatti (5)
- elija-feigl (3)
- songge1111 (3)
- AdaABen (3)
- simonecodispoti (3)
- SimonGrall (3)
- swapnilbaral-git (2)
- dave-doty (2)
- jinhzhou (2)
- lgruenewald (2)
- Zehui127 (2)
- juanitapombo (1)
- BradyAJohnston (1)
Top Pull Request Authors
- eryykr (9)
- ErikPoppleton (9)
- lorenzo-rovigatti (7)
- Subhajit-Roy-Partho (5)
- elija-feigl (5)
- dependabot[bot] (5)
- JeDeveloper (5)
- Lucandia (4)
- tgfrancesco (4)
- zoombya (4)
- mlsample (3)
- jinhzhou (2)
- dominjack (2)
- cgevans (2)
- RodenLuo (1)
Top Issue Labels
- bug (41)
- enhancement (19)
- documentation (9)
- question (1)
- wontfix (1)
Top Pull Request Labels
- dependencies (5)
- python (2)
Dependencies
- actions/checkout v2 composite
- actions/setup-python v2 composite
- ad-m/github-push-action master composite
- actions/checkout v2 composite
- actions/checkout v2 composite
- actions/setup-python v2 composite
- actions/checkout v2 composite
- Jinja2 <3.1
- Sphinx ==3.4.1
- docutils ==0.16
- ipython >=7.26.0
- myst_parser ==0.17.2
- sphinx-argparse >=0.3.1
- sphinx_rtd_theme ==0.5.0
- oxDNA_analysis_tools *