rosalution

software

Score: 4.189654742026425

Last synced: about 15 hours ago
JSON representation

Repository metadata:

Rosalution assists researchers study genetic variation 🧬 in patients 🧑🏾‍🤝‍🧑🏼 by helping select candidate animal models 🐀🐁🐠🪱 to replicate the variation to further research to derive, diagnose, and provide therapies for ultra-rare diseases. Developed by the UAB Center for Computational Genomics and Data Science (CGDS).

Host: GitHub
URL: https://github.com/uab-cgds-worthey/rosalution
Owner: uab-cgds-worthey
License: gpl-3.0
Created: 2022-12-14T20:44:46.000Z (over 3 years ago)
Default Branch: main
Last Pushed: 2026-04-17T17:14:06.000Z (2 months ago)
Last Synced: 2026-05-16T12:38:15.326Z (about 1 month ago)
Topics: software
Language: JavaScript
Homepage:
Size: 12.2 MB
Stars: 9
Watchers: 2
Forks: 2
Open Issues: 2
Metadata Files:
- Readme: README.md
- Changelog: CHANGELOG.md
- Contributing: CONTRIBUTING.md
- License: COPYING
- Code of conduct: CODE_OF_CONDUCT.md
- Citation: CITATION.cff

Owner metadata:

Name: Center for Computational Genomics and Data Science (CGDS)
Login: uab-cgds-worthey
Email:
Kind: organization
Description:
Website: https://sites.uab.edu/cgds/
Location:
Twitter:
Company:
Icon url: https://avatars.githubusercontent.com/u/110498780?v=4
Repositories: 2
Last Synced at: 2023-03-01T23:20:15.424Z
Profile URL: https://github.com/uab-cgds-worthey

GitHub Events

Total

Create event: 34
Delete event: 32
Issue comment event: 32
Pull request event: 41
Pull request review comment event: 22
Pull request review event: 43
Push event: 258
Release event: 9
Total: 471

Last Year

Create event: 13
Delete event: 8
Issue comment event: 3
Pull request event: 11
Pull request review comment event: 1
Pull request review event: 6
Push event: 72
Release event: 4
Total: 118

Committers metadata

Last synced: 4 days ago

Total Commits: 903
Total Committers: 6
Avg Commits per committer: 150.5
Development Distribution Score (DDS): 0.576

Commits in past year: 17
Committers in past year: 2
Avg Commits per committer in past year: 8.5
Development Distribution Score (DDS) in past year: 0.294

Name	Email	Commits
James Scherer	j**r@u**u	383
Angelina Uno-Antonison	a**n@g**m	242
Rabab Fatima	r**a@p**u	154
Alexander Moss	a**1@u**u	119
Jeremy Barkley	j**6@g**m	3
dependabot[bot]	4****]	2

Issue and Pull Request metadata

Last synced: about 1 month ago

Total issues: 2
Total pull requests: 153
Average time to close issues: 5 days
Average time to close pull requests: 2 days
Total issue authors: 1
Total pull request authors: 5
Average comments per issue: 0.0
Average comments per pull request: 0.88
Merged pull request: 138
Bot issues: 0
Bot pull requests: 4

Past year issues: 0
Past year pull requests: 16
Past year average time to close issues: N/A
Past year average time to close pull requests: 4 days
Past year issue authors: 0
Past year pull request authors: 2
Past year average comments per issue: 0
Past year average comments per pull request: 1.13
Past year merged pull request: 13
Past year bot issues: 0
Past year bot pull requests: 0

More stats: https://issues.ecosyste.ms/repositories/lookup?url=https://github.com/uab-cgds-worthey/rosalution

Top Issue Authors

SeriousHorncat (2)

Top Pull Request Authors

SeriousHorncat (82)
JmScherer (39)
fatimarabab (27)
dependabot[bot] (4)
kuthedk (1)

Top Issue Labels

enhancement (2)
good first issue (1)
documentation (1)

Top Pull Request Labels

enhancement (68)
bug (12)
documentation (9)
dependencies (4)

Dependencies

docs/prototypes/csv-to-table-prototype/package.json npm

@vitejs/plugin-vue ^4.2.3 development
vite ^4.4.5 development
vue ^3.3.4

docs/prototypes/csv-to-table-prototype/yarn.lock npm

@babel/parser 7.23.0
@esbuild/android-arm 0.18.20
@esbuild/android-arm64 0.18.20
@esbuild/android-x64 0.18.20
@esbuild/darwin-arm64 0.18.20
@esbuild/darwin-x64 0.18.20
@esbuild/freebsd-arm64 0.18.20
@esbuild/freebsd-x64 0.18.20
@esbuild/linux-arm 0.18.20
@esbuild/linux-arm64 0.18.20
@esbuild/linux-ia32 0.18.20
@esbuild/linux-loong64 0.18.20
@esbuild/linux-mips64el 0.18.20
@esbuild/linux-ppc64 0.18.20
@esbuild/linux-riscv64 0.18.20
@esbuild/linux-s390x 0.18.20
@esbuild/linux-x64 0.18.20
@esbuild/netbsd-x64 0.18.20
@esbuild/openbsd-x64 0.18.20
@esbuild/sunos-x64 0.18.20
@esbuild/win32-arm64 0.18.20
@esbuild/win32-ia32 0.18.20
@esbuild/win32-x64 0.18.20
@jridgewell/sourcemap-codec 1.4.15
@vitejs/plugin-vue 4.4.0
@vue/compiler-core 3.3.4
@vue/compiler-dom 3.3.4
@vue/compiler-sfc 3.3.4
@vue/compiler-ssr 3.3.4
@vue/reactivity 3.3.4
@vue/reactivity-transform 3.3.4
@vue/runtime-core 3.3.4
@vue/runtime-dom 3.3.4
@vue/server-renderer 3.3.4
@vue/shared 3.3.4
csstype 3.1.2
esbuild 0.18.20
estree-walker 2.0.2
fsevents 2.3.3
magic-string 0.30.5
nanoid 3.3.6
picocolors 1.0.0
postcss 8.4.31
rollup 3.29.4
source-map-js 1.0.2
vite 4.4.11
vue 3.3.4

.github/workflows/build-and-publish-docker-images.yml actions

actions/checkout v3 composite
docker/login-action v2.1.0 composite

.github/workflows/common-static-analysis.yml actions

actions/checkout v3 composite

.github/workflows/draft-paper.yml actions

actions/checkout v3 composite
actions/upload-artifact v1 composite
openjournals/openjournals-draft-action master composite

.github/workflows/nodejs.yml actions

actions/checkout v3 composite
actions/setup-node v3 composite

.github/workflows/python.yml actions

actions/checkout v3 composite
actions/setup-python v4 composite

.github/workflows/system-tests.yml actions

actions/checkout v3 composite
cypress-io/github-action v5 composite

backend/Dockerfile docker

python 3.9.10 build

docker-compose.local-production.yml docker

traefik latest

docker-compose.yml docker

mongo 5.0.9
traefik latest

docs/prototypes/fast-api-prototype/Dockerfile docker

python 3.9.10-alpine3.15 build

frontend/Dockerfile docker

nginx 1.17.6-alpine build
node 16.2-alpine3.12 build

frontend/package.json npm

@vitejs/plugin-vue 4.0.0 development
@vitest/coverage-c8 0.27.2 development
@vitest/ui 0.27.2 development
@vue/test-utils 2.2.7 development
eslint 8.32.0 development
eslint-config-google 0.14.0 development
eslint-plugin-vue 9.9.0 development
happy-dom 6.0.4 development
sinon 15.0.1 development
vite 4.0.4 development
vitest 0.27.2 development
@fortawesome/fontawesome-svg-core 6.2.1
@fortawesome/free-regular-svg-icons 6.2.1
@fortawesome/free-solid-svg-icons 6.2.1
@fortawesome/vue-fontawesome 3.0.2
@rollup/plugin-strip 3.0.2
vue 3.2.45
vue-router 4.1.6

frontend/yarn.lock npm

315 dependencies

system-tests/package.json npm

cypress 12.4.1 development
eslint 8.33.0 development
eslint-config-google 0.14.0 development
eslint-plugin-cypress 2.12.1 development

system-tests/yarn.lock npm

245 dependencies

backend/requirements.txt pypi

bcrypt ==4.0.1
fastapi ==0.74.1
itsdangerous ==2.1.2
jq ==1.4.0
passlib ==1.7.4
pylint ==2.15.10
pymongo ==4.3.3
pytest ==7.2.1
pytest-cov ==4.0.0
python-cas ==1.6.0
python-jose ==3.3.0
python-multipart ==0.0.5
requests ==2.28.2
uvicorn ==0.20.0
yapf ==0.32.0

.github/workflows/development-main-deployment.yml actions

actions/checkout v3 composite

docker-compose.staging.yml docker

ghcr.io/uab-cgds-worthey/rosalution/backend ${ROSALUTION_VERSION}
ghcr.io/uab-cgds-worthey/rosalution/frontend ${ROSALUTION_VERSION}

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