JOSS: https://github.com/RECeSS-EU-Project/stanscofi/

collaborative-filtering drug-repurposing open-science python science-reproducibility

Score: 0.0

Last synced: about 2 hours ago
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Repository metadata:

Package for STANdard drug Screening by COllaborative FIltering. Performs benchmarks against datasets and SotA algorithms, and implements training, validation and testing procedures.

• Host: GitHub
• URL: https://github.com/RECeSS-EU-Project/stanscofi/
• Owner: RECeSS-EU-Project
• License: mit
• Created: 2023-06-09T10:55:37.000Z (about 3 years ago)
• Default Branch: master
• Last Pushed: 2025-02-20T15:17:21.000Z (over 1 year ago)
• Last Synced: 2025-10-26T01:24:07.206Z (8 months ago)
• Topics: collaborative-filtering, drug-repurposing, open-science, python, science-reproducibility
• Language: Python
• Homepage: https://recess-eu-project.github.io/stanscofi/
• Size: 19.2 MB
• Stars: 1
• Watchers: 1
• Forks: 1
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE
  • Citation: CITATION.cff
  • Codemeta: codemeta.json
  • Zenodo: .zenodo.json

CodeMeta metadata:

• @context: https://doi.org/10.5063/schema/codemeta-2.0
• @type: SoftwareSourceCode
• License: https://spdx.org/licenses/MIT
• Code repository: git+https://github.com/RECeSS-EU-Project/stanscofi.git
• Date created: 2023-06-09
• Date published: 2023-06-10
• Date modified: 2023-07-20
• Download url: https://github.com/RECeSS-EU-Project/stanscofi/archive/refs/heads/master.zip
• Issue tracker: https://github.com/RECeSS-EU-Project/stanscofi/issues
• Name: stanscofi
• Version: 2.0.0
• Software version: 2.0.0
• Identifier: 10.5281/zenodo.8038847
• Description: Package for STANdard drug Screening by COllaborative FIltering. Performs benchmarks against datasets and SotA algorithms, and implements training, validation and testing procedures.
• Application category: Drug development
• Release notes: This version passes all automated tests, and is automatically uploaded to Anaconda, PyPI, and Zenodo.
• Funding: RECeSS - Robust Explainable Controllable Standard for drug Screening (101102016)
• Development status: active
• Is part of: https://recess-eu-project.github.io/
• Readme: https://github.com/RECeSS-EU-Project/stanscofi/blob/master/README.md
• Funder:
  • @type: Organization
  • Name: European Union's Horizon 2020 research and innovation programme
• Keywords:
  • Python
  • collaborative filtering
  • open science
  • drug repurposing
  • science reproducibility
• Programming language:
  • Python 3
• Software requirements:
  • pandas>=1.1.4
  • numpy>=1.19.4
  • scikit-learn>=0.24.0
  • scipy>=1.5.4
  • matplotlib>=3.3.2
  • threadpoolctl>=3.1.0
  • joblib>=1.0.1
  • tqdm>=4.58.0
  • codecarbon>=2.2.2
  • seaborn>=0.11.0
• Author:
  • • @type: Person
    • @id: https://orcid.org/0000-0003-3238-0258
    • Given name: Clémence
    • Family name: Réda
    • Email: clemence.reda@uni-rostock.de
    • Affiliation:
      • @type: Organization
      • Name: Systems Biology and Informatics, University of Rostock, Rostock, Germany
• Maintainer:
  • • @type: Person
    • @id: https://orcid.org/0000-0003-3238-0258
    • Given name: Clémence
    • Family name: Réda
    • Email: clemence.reda@uni-rostock.de
    • Affiliation:
      • @type: Organization
      • Name: Systems Biology and Informatics, University of Rostock, Rostock, Germany

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Owner metadata:

• Name: RECeSS EU project
• Login: RECeSS-EU-Project
• Email:
• Kind: user
• Description: The RECeSS (Robust Explainable Controllable Standard for drug Screening) project is funded by a Marie Skłodowska-Curie Postdoctoral Fellowship 2022.
• Website: http://recess-eu-project.github.io/
• Location: Rostock, Germany
• Twitter: recess_eu_proj
• Company: Universität Rostock
• Icon url: https://avatars.githubusercontent.com/u/132160795?u=c23c905c5207f47d33d7b77fdf48e76d89d3dd6d&v=4
• Repositories: 1
• Last Synced at: 2023-05-03T15:48:09.263Z
• Profile URL: https://github.com/RECeSS-EU-Project

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GitHub Events

Total

• Push event: 4
• Watch event: 1
• Total: 5

Last Year

• Push event: 4
• Watch event: 1
• Total: 5

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Committers metadata

Last synced: 8 months ago

Name	Email	Commits
REDA Clemence	c****a@i****r	185

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Issue and Pull Request metadata

Last synced: 10 months ago

More stats: https://issues.ecosyste.ms/repositories/lookup?url=https://github.com/RECeSS-EU-Project/stanscofi/

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Dependencies