JOSS: https://github.com/lskatz/fasten
bioinformatics fastq-files rust
Score: 15.547018835642133
Last synced: about 2 hours ago
JSON representation
Repository metadata:
:construction_worker: Fasten toolkit, for streaming operations on fastq files
- Host: GitHub
- URL: https://github.com/lskatz/fasten
- Owner: lskatz
- License: mit
- Created: 2018-01-23T14:16:11.000Z (over 8 years ago)
- Default Branch: master
- Last Pushed: 2025-10-24T21:01:44.000Z (8 months ago)
- Last Synced: 2026-05-29T10:03:42.269Z (24 days ago)
- Topics: bioinformatics, fastq-files, rust
- Language: Rust
- Homepage:
- Size: 14 MB
- Stars: 82
- Watchers: 3
- Forks: 7
- Open Issues: 4
-
Metadata Files:
- Readme: README.md
- Contributing: CONTRIBUTING.md
- License: LICENSE
- Code of conduct: CODE_OF_CONDUCT.md
- Citation: CITATION.cff
Owner metadata:
- Name: Lee Katz
- Login: lskatz
- Email:
- Kind: user
- Description:
- Website: https://lskatz.github.io
- Location: Atlanta, GA
- Twitter: lskatz
- Company: CDC (work) + personal projects
- Icon url: https://avatars.githubusercontent.com/u/14798?v=4
- Repositories: 138
- Last Synced at: 2023-04-11T10:55:27.487Z
- Profile URL: https://github.com/lskatz
GitHub Events
Total
- Create event: 8
- Delete event: 6
- Issue comment event: 4
- Issues event: 2
- Pull request event: 10
- Push event: 49
- Release event: 5
- Watch event: 5
- Total: 89
Last Year
- Create event: 1
- Delete event: 1
- Issue comment event: 4
- Pull request event: 1
- Push event: 33
- Release event: 2
- Watch event: 2
- Total: 44
Committers metadata
Last synced: 9 days ago
Total Commits: 367
Total Committers: 4
Avg Commits per committer: 91.75
Development Distribution Score (DDS): 0.019
Commits in past year: 5
Committers in past year: 1
Avg Commits per committer in past year: 5.0
Development Distribution Score (DDS) in past year: 0.0
| Name | Commits | |
|---|---|---|
| Lee Katz - Aspen | g****2@c****v | 360 |
| Andrea Telatin, M1 | 1****n | 5 |
| Roderick Bovee | r****e@g****m | 1 |
| John Phan | j****n@g****m | 1 |
Issue and Pull Request metadata
Last synced: 8 months ago
Total issues: 17
Total pull requests: 34
Average time to close issues: 8 months
Average time to close pull requests: 2 days
Total issue authors: 9
Total pull request authors: 4
Average comments per issue: 2.53
Average comments per pull request: 0.15
Merged pull request: 31
Bot issues: 0
Bot pull requests: 0
Past year issues: 2
Past year pull requests: 12
Past year average time to close issues: 2 days
Past year average time to close pull requests: about 2 hours
Past year issue authors: 2
Past year pull request authors: 1
Past year average comments per issue: 5.5
Past year average comments per pull request: 0.0
Past year merged pull request: 12
Past year bot issues: 0
Past year bot pull requests: 0
Top Issue Authors
- bovee (4)
- lskatz (4)
- jianshu93 (2)
- telatin (2)
- sharkLoc (1)
- ghuls (1)
- kapsakcj (1)
- shenwei356 (1)
- chrisgulvik (1)
Top Pull Request Authors
- lskatz (24)
- telatin (8)
- bovee (1)
- jhphan (1)
Top Issue Labels
- wontfix (1)
Top Pull Request Labels
Package metadata
- Total packages: 1
-
Total downloads:
- cargo: 16,421 total
- Total dependent packages: 0
- Total dependent repositories: 0
- Total versions: 13
- Total maintainers: 1
crates.io: fasten
A set of scripts to run basic analysis on fastq files
- Homepage:
- Documentation: https://docs.rs/fasten/
- Licenses: MIT
- Latest release: 0.9.0 (published 8 months ago)
- Last Synced: 2026-06-12T17:00:46.841Z (9 days ago)
- Versions: 13
- Dependent Packages: 0
- Dependent Repositories: 0
- Downloads: 16,421 Total
-
Rankings:
- Stargazers count: 17.197%
- Forks count: 20.266%
- Average: 25.902%
- Downloads: 28.918%
- Dependent repos count: 29.318%
- Dependent packages count: 33.812%
- Maintainers (1)
Dependencies
- actions-rs/cargo v1 composite
- actions-rs/toolchain v1 composite
- actions/checkout v2 composite
- actions-rs/toolchain v1 composite
- actions/checkout v3 composite
- conda-incubator/setup-miniconda v2 composite
- actions/checkout v2 composite
- docker/build-push-action ad44023a93711e3deb337508980b4b5e9bcdc5dc composite
- docker/login-action f054a8b539a109f9f41c372932f1ae047eff08c9 composite
- docker/metadata-action 98669ae865ea3cffbcbaa878cf57c20bbf1c6c38 composite
- actions/checkout v2 composite
- actions/upload-artifact v1 composite
- openjournals/openjournals-draft-action master composite
- actions-rs/cargo v1 composite
- actions-rs/toolchain v1 composite
- actions/checkout v2 composite
- alpine 3.14 build
- rust 1.59.0-alpine3.14 build