JOSS: https://github.com/lskatz/fasten
bioinformatics fastq-files rust
Score: 16.014158788092445
Last synced: about 15 hours ago
JSON representation
Repository metadata:
:construction_worker: Fasten toolkit, for streaming operations on fastq files
- Host: GitHub
- URL: https://github.com/lskatz/fasten
- Owner: lskatz
- License: mit
- Created: 2018-01-23T14:16:11.000Z (over 8 years ago)
- Default Branch: master
- Last Pushed: 2026-09-10T21:13:25.000Z (19 days ago)
- Last Synced: 2026-09-12T22:27:18.695Z (17 days ago)
- Topics: bioinformatics, fastq-files, rust
- Language: Rust
- Homepage: https://lskatz.github.io/fasten/fasten
- Size: 14.1 MB
- Stars: 86
- Watchers: 3
- Forks: 8
- Open Issues: 5
-
Metadata Files:
- Readme: README.md
- Contributing: CONTRIBUTING.md
- License: LICENSE
- Code of conduct: CODE_OF_CONDUCT.md
- Citation: CITATION.cff
Owner metadata:
- Name: Lee Katz
- Login: lskatz
- Email:
- Kind: user
- Description:
- Website: https://lskatz.github.io
- Location: Atlanta, GA
- Twitter: lskatz
- Company: CDC (work) + personal projects
- Icon url: https://avatars.githubusercontent.com/u/14798?v=4
- Repositories: 174
- Last Synced at: 2026-09-25T17:58:29.381Z
- Profile URL: https://github.com/lskatz
GitHub Events
Total
- Create event: 8
- Delete event: 6
- Issue comment event: 7
- Issues event: 2
- Pull request event: 10
- Pull request review comment event: 2
- Push event: 50
- Release event: 5
- Watch event: 5
- Total: 95
Last Year
- Create event: 1
- Delete event: 1
- Issue comment event: 7
- Pull request event: 1
- Pull request review comment event: 2
- Push event: 34
- Release event: 2
- Watch event: 1
- Total: 49
Committers metadata
Last synced: 1 day ago
Total Commits: 374
Total Committers: 6
Avg Commits per committer: 62.333
Development Distribution Score (DDS): 0.035
Commits in past year: 12
Committers in past year: 3
Avg Commits per committer in past year: 4.0
Development Distribution Score (DDS) in past year: 0.5
| Name | Commits | |
|---|---|---|
| Lee Katz - Aspen | g****2@c****v | 361 |
| Andrea Telatin, M1 | 1****n | 5 |
| Himadri Bhattacharjee | 1****h | 4 |
| Copilot | 1****t | 2 |
| Roderick Bovee | r****e@g****m | 1 |
| John Phan | j****n@g****m | 1 |
Issue and Pull Request metadata
Last synced: 1 day ago
Total issues: 18
Total pull requests: 42
Average time to close issues: 8 months
Average time to close pull requests: 1 day
Total issue authors: 10
Total pull request authors: 6
Average comments per issue: 2.5
Average comments per pull request: 0.55
Merged pull request: 37
Bot issues: 0
Bot pull requests: 0
Past year issues: 2
Past year pull requests: 10
Past year average time to close issues: 2 days
Past year average time to close pull requests: about 17 hours
Past year issue authors: 2
Past year pull request authors: 3
Past year average comments per issue: 6.5
Past year average comments per pull request: 1.8
Past year merged pull request: 8
Past year bot issues: 0
Past year bot pull requests: 0
Top Issue Authors
- bovee (4)
- lskatz (4)
- jianshu93 (2)
- telatin (2)
- lavafroth (1)
- sharkLoc (1)
- ghuls (1)
- kapsakcj (1)
- shenwei356 (1)
- chrisgulvik (1)
Top Pull Request Authors
- lskatz (24)
- telatin (8)
- lavafroth (5)
- Copilot (3)
- bovee (1)
- jhphan (1)
Top Issue Labels
- wontfix (1)
Top Pull Request Labels
Package metadata
- Total packages: 1
-
Total downloads:
- cargo: 16,506 total
- Total dependent packages: 0
- Total dependent repositories: 0
- Total versions: 13
- Total maintainers: 1
crates.io: fasten
A set of scripts to run basic analysis on fastq files
- Homepage:
- Documentation: https://docs.rs/fasten/
- Licenses: MIT
- Latest release: 0.9.0 (published 11 months ago)
- Last Synced: 2026-09-28T16:01:06.859Z (1 day ago)
- Versions: 13
- Dependent Packages: 0
- Dependent Repositories: 0
- Downloads: 16,506 Total
-
Rankings:
- Stargazers count: 17.197%
- Forks count: 20.266%
- Average: 25.902%
- Downloads: 28.918%
- Dependent repos count: 29.318%
- Dependent packages count: 33.812%
- Maintainers (1)
Dependencies
- actions-rs/cargo v1 composite
- actions-rs/toolchain v1 composite
- actions/checkout v2 composite
- actions-rs/toolchain v1 composite
- actions/checkout v3 composite
- conda-incubator/setup-miniconda v2 composite
- actions/checkout v2 composite
- docker/build-push-action ad44023a93711e3deb337508980b4b5e9bcdc5dc composite
- docker/login-action f054a8b539a109f9f41c372932f1ae047eff08c9 composite
- docker/metadata-action 98669ae865ea3cffbcbaa878cf57c20bbf1c6c38 composite
- actions/checkout v2 composite
- actions/upload-artifact v1 composite
- openjournals/openjournals-draft-action master composite
- actions-rs/cargo v1 composite
- actions-rs/toolchain v1 composite
- actions/checkout v2 composite
- alpine 3.14 build
- rust 1.59.0-alpine3.14 build