JOSS: https://github.com/AdaptInfer/Contextualized
bioinformatics machine-learning medical-informatics statistics
Score: 7.635303886259415
Last synced: about 2 hours ago
JSON representation
Repository metadata:
An SKLearn-style toolbox for estimating and analyzing models, distributions, and functions with context-specific parameters.
- Host: GitHub
- URL: https://github.com/AdaptInfer/Contextualized
- Owner: AdaptInfer
- License: gpl-3.0
- Created: 2021-08-03T20:29:06.000Z (about 5 years ago)
- Default Branch: main
- Last Pushed: 2026-03-06T21:58:59.000Z (6 months ago)
- Last Synced: 2026-07-30T14:57:49.632Z (22 days ago)
- Topics: bioinformatics, machine-learning, medical-informatics, statistics
- Language: Python
- Homepage: http://contextualized.ml/
- Size: 102 MB
- Stars: 76
- Watchers: 2
- Forks: 13
- Open Issues: 39
-
Metadata Files:
- Readme: README.md
- Contributing: CONTRIBUTING.md
- License: LICENSE
Owner metadata:
- Name: Adaptive Inference Lab
- Login: AdaptInfer
- Email:
- Kind: organization
- Description:
- Website: adaptinfer.net
- Location: United States of America
- Twitter: AdaptInferLab
- Company:
- Icon url: https://avatars.githubusercontent.com/u/170001124?v=4
- Repositories: 1
- Last Synced at: 2025-06-04T05:13:45.652Z
- Profile URL: https://github.com/AdaptInfer
GitHub Events
Total
- Create event: 2
- Issue comment event: 2
- Pull request event: 1
- Watch event: 1
- Total: 6
Last Year
- Create event: 2
- Issue comment event: 2
- Pull request event: 1
- Watch event: 1
- Total: 6
Committers metadata
Last synced: 1 day ago
Total Commits: 537
Total Committers: 18
Avg Commits per committer: 29.833
Development Distribution Score (DDS): 0.469
Commits in past year: 27
Committers in past year: 5
Avg Commits per committer in past year: 5.4
Development Distribution Score (DDS) in past year: 0.556
| Name | Commits | |
|---|---|---|
| Caleb Ellington | c****n@g****m | 285 |
| Ben Lengerich | b****h@g****m | 142 |
| Peter Li | p****i@P****l | 17 |
| wtt102 | w****2@g****m | 16 |
| aaron10l | a****4@g****m | 15 |
| Samuel-WM | s****h@g****m | 12 |
| Peter Li | p****i@M****n | 10 |
| Andrea Rubbi | A****i | 9 |
| Peter Li | p****i@P****l | 8 |
| juwayni lucman | l****i@g****m | 5 |
| Peter Li | p****i@w****u | 5 |
| Jason Paul Miller | j****r@g****m | 3 |
| Peter Li | p****i@w****u | 3 |
| CheeseLee888 | c****8@g****m | 2 |
| PaulCCCCCCH | p****h@g****m | 2 |
| Baiheng Chen | 1****n | 1 |
| Peter Li | p****i@w****u | 1 |
| Jannik Deuschel | 6****C | 1 |
Issue and Pull Request metadata
Last synced: 1 day ago
Total issues: 0
Total pull requests: 5
Average time to close issues: N/A
Average time to close pull requests: 10 days
Total issue authors: 0
Total pull request authors: 3
Average comments per issue: 0
Average comments per pull request: 0.8
Merged pull request: 2
Bot issues: 0
Bot pull requests: 0
Past year issues: 0
Past year pull requests: 4
Past year average time to close issues: N/A
Past year average time to close pull requests: 12 days
Past year issue authors: 0
Past year pull request authors: 2
Past year average comments per issue: 0
Past year average comments per pull request: 0.75
Past year merged pull request: 2
Past year bot issues: 0
Past year bot pull requests: 0
Top Issue Authors
Top Pull Request Authors
- Samuel-WM (2)
- CheeseLee888 (2)
- cnellington (1)
Top Issue Labels
Top Pull Request Labels
Dependencies
- actions/checkout v3 composite
- actions/setup-python v3 composite
- actions/checkout v3 composite
- actions/setup-python v3 composite
- dill *
- igraph *
- matplotlib *
- numpy *
- pytorch-lightning <=1.9.4
- scikit-learn *
- torch <=1.13.1
- torchvision *
- actions/checkout v4 composite
- actions/setup-python v4 composite
- pypa/gh-action-pypi-publish release/v1 composite
- actions/checkout v4 composite
- actions/deploy-pages v4 composite
- actions/setup-python v5 composite
- actions/upload-pages-artifact v3 composite
- Sphinx ==5.0.2 development
- black ==24.4.0 development
- build ==1.0.3 development
- jupyter-book ==0.15.1 development
- myst-parser ==0.18.1 development
- pylint ==2.15.5 development
- pytest ==7.4.3 development
- sphinx-book-theme ==1.0.1 development
- sphinx-jupyterbook-latex ==0.5.2 development
- sphinx-rtd-theme ==2.0.0 development
- sphinx_external_toc ==0.3.1 development
- toml ==0.10.2 development
- tomli ==2.0.1 development
- twine ==4.0.2 development