JOSS: https://github.com/labsyspharm/scimap
image-analysis pypi python single-cell-analysis spatial-analysis
Score: 16.55133155601184
Last synced: about 19 hours ago
JSON representation
Repository metadata:
Spatial Single-Cell Analysis Toolkit
- Host: GitHub
- URL: https://github.com/labsyspharm/scimap
- Owner: labsyspharm
- License: mit
- Created: 2020-06-09T20:08:44.000Z (about 6 years ago)
- Default Branch: master
- Last Pushed: 2026-03-11T23:29:43.000Z (3 months ago)
- Last Synced: 2026-04-04T21:57:16.285Z (3 months ago)
- Topics: image-analysis, pypi, python, single-cell-analysis, spatial-analysis
- Language: Python
- Homepage: https://scimap.xyz/
- Size: 43.9 MB
- Stars: 110
- Watchers: 1
- Forks: 36
- Open Issues: 52
-
Metadata Files:
- Readme: README.md
- License: LICENSE
Owner metadata:
- Name: Laboratory of Systems Pharmacology @ Harvard
- Login: labsyspharm
- Email: hits@harvard.edu
- Kind: organization
- Description: Reinventing the fundamental science underlying the development of new medicines and their use in individual patients.
- Website: https://labsyspharm.org/
- Location: Boston, MA
- Twitter:
- Company:
- Icon url: https://avatars.githubusercontent.com/u/47149595?v=4
- Repositories: 150
- Last Synced at: 2024-12-24T13:42:49.677Z
- Profile URL: https://github.com/labsyspharm
GitHub Events
Total
- Create event: 2
- Fork event: 10
- Issue comment event: 48
- Issues event: 30
- Pull request event: 10
- Push event: 68
- Release event: 1
- Watch event: 29
- Total: 198
Last Year
- Create event: 1
- Fork event: 3
- Issue comment event: 14
- Issues event: 11
- Pull request event: 6
- Push event: 19
- Watch event: 15
- Total: 69
Committers metadata
Last synced: 3 months ago
Total Commits: 838
Total Committers: 14
Avg Commits per committer: 59.857
Development Distribution Score (DDS): 0.098
Commits in past year: 13
Committers in past year: 3
Avg Commits per committer in past year: 4.333
Development Distribution Score (DDS) in past year: 0.231
| Name | Commits | |
|---|---|---|
| Ajit Johnson Nirmal | a****n@g****m | 756 |
| amorje | a****e@g****m | 49 |
| dependabot[bot] | 4****] | 11 |
| Yu-An Chen | a****2@g****m | 6 |
| sarafiller | 8****r | 6 |
| Radkevich | e****h@M****g | 2 |
| tdurieux | d****s@h****m | 1 |
| emmanuel-contreras | e****s@w****u | 1 |
| SarkkinenJ | 9****J | 1 |
| MargotCh | m****e@g****m | 1 |
| Jeremy Muhlich | j****h@b****g | 1 |
| Charlotte Soneson | c****n@g****m | 1 |
| Artem Sokolov | a****v@g****m | 1 |
| Sara Filler | s****r@s****u | 1 |
Issue and Pull Request metadata
Last synced: 3 months ago
Total issues: 88
Total pull requests: 67
Average time to close issues: 2 months
Average time to close pull requests: about 1 month
Total issue authors: 52
Total pull request authors: 14
Average comments per issue: 2.08
Average comments per pull request: 0.4
Merged pull request: 43
Bot issues: 0
Bot pull requests: 33
Past year issues: 11
Past year pull requests: 5
Past year average time to close issues: 26 days
Past year average time to close pull requests: 3 days
Past year issue authors: 8
Past year pull request authors: 3
Past year average comments per issue: 1.73
Past year average comments per pull request: 1.2
Past year merged pull request: 3
Past year bot issues: 0
Past year bot pull requests: 2
Top Issue Authors
- ajitjohnson (6)
- josenimo (5)
- sailseem (4)
- PietroD (3)
- rach-crc (3)
- yerahko (3)
- kevinyamauchi (3)
- andreevg04 (3)
- LukasHats (3)
- bugie19 (3)
- MargotCh (2)
- vraghu90 (2)
- virlyananda (2)
- pakiessling (2)
- emmanuel-contreras (2)
Top Pull Request Authors
- dependabot[bot] (33)
- amorje (11)
- sarafiller (5)
- Yu-AnChen (4)
- emmanuel-contreras (2)
- emir-radkevich (2)
- SarkkinenJ (2)
- csoneson (2)
- ArtemSokolov (1)
- MargotCh (1)
- jmuhlich (1)
- ruiheesi (1)
- adamjtaylor (1)
- tdurieux (1)
Top Issue Labels
- enhancement (3)
- bug (3)
Top Pull Request Labels
- dependencies (33)
- python (2)
Package metadata
- Total packages: 1
-
Total downloads:
- pypi: 6,798 last-month
- Total dependent packages: 0
- Total dependent repositories: 1
- Total versions: 261
- Total maintainers: 1
pypi.org: scimap
Spatial Single-Cell Analysis Toolkit
- Homepage: https://pypi.org/project/scimap/
- Documentation: https://scimap.xyz
- Licenses: MIT
- Latest release: 2.3.6 (published 3 months ago)
- Last Synced: 2026-04-07T09:51:06.270Z (3 months ago)
- Versions: 261
- Dependent Packages: 0
- Dependent Repositories: 1
- Downloads: 6,798 Last month
-
Rankings:
- Downloads: 7.419%
- Forks count: 8.892%
- Stargazers count: 9.817%
- Dependent packages count: 10.126%
- Average: 11.558%
- Dependent repos count: 21.535%
- Maintainers (1)
Dependencies
- 197 dependencies
- abatilo/actions-poetry v2.1.4 composite
- actions/cache v3 composite
- actions/checkout v3 composite
- actions/setup-python v3 composite
- docker/build-push-action v2 composite
- docker/login-action v1 composite
- docker/setup-buildx-action v1 composite
- docker/setup-qemu-action v1 composite
- actions/checkout v3 composite
- actions/setup-python v3 composite
- python 3.8 build