JOSS: https://github.com/genotoul-bioinfo/Binette
bioinformatics-tool metagenomics metagenomics-binning microbiology
Score: 8.954156966583772
Last synced: about 22 hours ago
JSON representation
Repository metadata:
A fast and accurate binning refinement tool to constructs high quality MAGs from the output of multiple binning tools.
- Host: GitHub
- URL: https://github.com/genotoul-bioinfo/Binette
- Owner: genotoul-bioinfo
- License: gpl-3.0
- Created: 2023-01-18T09:14:31.000Z (over 3 years ago)
- Default Branch: main
- Last Pushed: 2026-09-28T19:43:21.000Z (7 days ago)
- Last Synced: 2026-09-30T19:52:33.018Z (5 days ago)
- Topics: bioinformatics-tool, metagenomics, metagenomics-binning, microbiology
- Language: Python
- Homepage: https://binette.readthedocs.io
- Size: 963 KB
- Stars: 56
- Watchers: 3
- Forks: 2
- Open Issues: 4
-
Metadata Files:
- Readme: README.md
- Contributing: docs/contributing.md
- License: LICENSE
Owner metadata:
- Name: Genotoul Bioinfo
- Login: genotoul-bioinfo
- Email:
- Kind: organization
- Description: The genotoul bioinfo plateform
- Website: http://bioinfo.genotoul.fr/index.php/about-us/
- Location: Toulouse, France
- Twitter:
- Company:
- Icon url: https://avatars.githubusercontent.com/u/36693932?v=4
- Repositories: 8
- Last Synced at: 2026-10-03T04:56:17.656Z
- Profile URL: https://github.com/genotoul-bioinfo
GitHub Events
Total
- Create event: 22
- Delete event: 11
- Fork event: 2
- Issue comment event: 108
- Issues event: 39
- Pull request event: 36
- Push event: 73
- Release event: 4
- Watch event: 25
- Total: 320
Last Year
- Create event: 1
- Delete event: 2
- Fork event: 1
- Issue comment event: 13
- Issues event: 11
- Pull request event: 3
- Push event: 4
- Watch event: 4
- Total: 39
Committers metadata
Last synced: 2 days ago
Total Commits: 461
Total Committers: 3
Avg Commits per committer: 153.667
Development Distribution Score (DDS): 0.067
Commits in past year: 60
Committers in past year: 2
Avg Commits per committer in past year: 30.0
Development Distribution Score (DDS) in past year: 0.067
| Name | Commits | |
|---|---|---|
| JeanMainguy | j****y@o****r | 430 |
| Jean Mainguy | j****y@i****r | 27 |
| Jean Mainguy | j****y@l****r | 4 |
Issue and Pull Request metadata
Last synced: 2 days ago
Total issues: 37
Total pull requests: 83
Average time to close issues: about 1 month
Average time to close pull requests: 4 days
Total issue authors: 23
Total pull request authors: 1
Average comments per issue: 3.89
Average comments per pull request: 0.0
Merged pull request: 68
Bot issues: 0
Bot pull requests: 0
Past year issues: 6
Past year pull requests: 11
Past year average time to close issues: about 2 months
Past year average time to close pull requests: 14 days
Past year issue authors: 5
Past year pull request authors: 1
Past year average comments per issue: 2.17
Past year average comments per pull request: 0.0
Past year merged pull request: 6
Past year bot issues: 0
Past year bot pull requests: 0
Top Issue Authors
- jolespin (8)
- lskatz (5)
- captaindet (3)
- guangingmai (2)
- gabrieleghiotto (1)
- bpenaud (1)
- SebastianDall (1)
- fjell-dev (1)
- schmigle (1)
- zzsunday (1)
- ochkalova (1)
- Serka-M (1)
- Gu2uMo (1)
- tnmquann (1)
- osvatic (1)
Top Pull Request Authors
- JeanMainguy (83)
Top Issue Labels
- bug (10)
- enhancement (8)
- question (4)
- joss_review (3)
- documentation (1)
- duplicate (1)
Top Pull Request Labels
Package metadata
- Total packages: 1
-
Total downloads:
- pypi: 42 last-month
- Total dependent packages: 0
- Total dependent repositories: 0
- Total versions: 13
- Total maintainers: 1
pypi.org: binette
Binette: accurate binning refinement tool to constructs high quality MAGs.
- Homepage:
- Documentation: https://binette.readthedocs.io
- Licenses: gpl-3.0
- Latest release: 1.2.1 (published 11 months ago)
- Last Synced: 2026-10-03T21:02:48.960Z (2 days ago)
- Versions: 13
- Dependent Packages: 0
- Dependent Repositories: 0
- Downloads: 42 Last month
-
Rankings:
- Dependent packages count: 9.978%
- Average: 37.92%
- Dependent repos count: 65.862%
- Maintainers (1)
Dependencies
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- conda-incubator/setup-miniconda v4 composite
- joblib >=1.0,<2.0
- networkx >=3.0,<4.0
- numpy >1.24,<3.0
- pandas >=2,<3
- pyfastx >=2,<3
- pyroaring >=1.0.0,<2.0.0
- pyrodigal >=3,<4
- rich >=12.0.0,<14.0.0
- typer >=0.9.0,<1.0.0
- actions/checkout v4 composite
- actions/setup-python v4 composite