{"id":358380,"url":"https://github.com/tesselle/tabula","last_synced_at":"2026-06-22T23:01:54.306Z","repository":{"id":38411139,"uuid":"156100586","full_name":"tesselle/tabula","owner":"tesselle","description":"Analysis and Visualization of Archaeological Count Data - :exclamation: Moved to https://codeberg.org/tesselle/tabula","archived":false,"fork":false,"pushed_at":"2025-12-15T18:25:57.000Z","size":17139,"stargazers_count":33,"open_issues_count":0,"forks_count":5,"subscribers_count":5,"default_branch":"main","last_synced_at":"2026-03-08T21:09:36.205Z","etag":null,"topics":["archaeological-science","archaeology","data-visualization","r-package"],"latest_commit_sha":null,"homepage":"https://packages.tesselle.org/tabula/","language":"R","has_issues":false,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"gpl-3.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/tesselle.png","metadata":{"files":{"readme":"README.Rmd","changelog":"NEWS.md","contributing":null,"funding":null,"license":"LICENSE.md","code_of_conduct":null,"threat_model":null,"audit":null,"citation":"CITATION.cff","codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":"codemeta.json","zenodo":null,"notice":null,"maintainers":null,"copyright":null,"agents":null,"dco":null,"cla":null}},"created_at":"2018-11-04T16:14:15.000Z","updated_at":"2026-01-04T18:27:27.000Z","dependencies_parsed_at":"2024-04-30T16:42:29.380Z","dependency_job_id":"a3beb286-a8c9-46fd-9390-ac7f1275197f","html_url":"https://github.com/tesselle/tabula","commit_stats":{"total_commits":622,"total_committers":4,"mean_commits":155.5,"dds":0.297427652733119,"last_synced_commit":"041dcdc1d0d531c24a4938d07eccf61813e96ee2"},"previous_names":["nfrerebeau/tabula"],"tags_count":22,"template":false,"template_full_name":null,"purl":"pkg:github/tesselle/tabula","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/tesselle%2Ftabula","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/tesselle%2Ftabula/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/tesselle%2Ftabula/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/tesselle%2Ftabula/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/tesselle","download_url":"https://codeload.github.com/tesselle/tabula/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/tesselle%2Ftabula/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":286080680,"owners_count":31203175,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2026-03-30T15:24:02.938Z","status":"ssl_error","status_checked_at":"2026-03-30T15:23:44.804Z","response_time":138,"last_error":"SSL_connect returned=1 errno=0 peeraddr=140.82.121.5:443 state=error: unexpected eof while reading","robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":false,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"tesselle","name":"tesselle","uuid":"78033555","kind":"organization","description":"A collection of R packages for archaeological research and teaching","email":null,"website":"www.tesselle.org","location":"France","twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/78033555?v=4","repositories_count":5,"last_synced_at":"2023-03-06T22:27:55.587Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/tesselle","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2022-11-16T22:44:35.599Z","updated_at":"2023-03-06T22:27:55.590Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/tesselle","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/tesselle/repositories"},"packages":[],"commits":{"id":1404454,"full_name":"tesselle/tabula","default_branch":"main","total_commits":713,"total_committers":3,"total_bot_commits":0,"total_bot_committers":0,"mean_commits":237.66666666666666,"dds":0.0042075736325385416,"past_year_total_commits":36,"past_year_total_committers":1,"past_year_total_bot_commits":0,"past_year_total_bot_committers":0,"past_year_mean_commits":36.0,"past_year_dds":0.0,"last_synced_at":"2026-03-03T22:44:05.797Z","last_synced_commit":"e9f72763cd2abf4223c0ffd519626d902423559c","created_at":"2023-10-25T13:40:54.315Z","updated_at":"2026-03-03T22:44:05.765Z","committers":[{"name":"nfrerebeau","email":"33983845+nfrerebeau","login":"nfrerebeau","count":710},{"name":"Ben Marwick","email":"benmarwick@hotmail.com","login":"benmarwick","count":2},{"name":"soodoku","email":"gsood07@gmail.com","login":"soodoku","count":1}],"past_year_committers":[{"name":"nfrerebeau","email":"nicolas.frerebeau@u-bordeaux-montaigne.fr","login":"nfrerebeau","count":36}],"commits_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories/tesselle%2Ftabula/commits","host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2026-03-04T00:00:12.294Z","repositories_count":6184565,"commits_count":930631560,"contributors_count":36043903,"owners_count":1146405,"icon_url":"https://github.com/github.png","host_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories"}},"issues":{"table":{"full_name":"tesselle/tabula","html_url":"https://github.com/tesselle/tabula","last_synced_at":"2025-10-24T07:11:53.428Z","status":"error","issues_count":20,"pull_requests_count":6,"avg_time_to_close_issue":1716782.3,"avg_time_to_close_pull_request":568343.5,"issues_closed_count":20,"pull_requests_closed_count":6,"pull_request_authors_count":4,"issue_authors_count":7,"avg_comments_per_issue":1.05,"avg_comments_per_pull_request":0.5,"merged_pull_requests_count":5,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":0,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":0,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0,"created_at":"2023-05-10T22:37:13.871Z","updated_at":"2025-10-24T07:11:53.428Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/tesselle%2Ftabula","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/tesselle%2Ftabula/issues","issue_labels_count":{"table":{"bug":7,"enhancement":6,"documentation":1}},"pull_request_labels_count":{"table":{}},"issue_author_associations_count":{"table":{"MEMBER":10,"CONTRIBUTOR":6,"NONE":4}},"pull_request_author_associations_count":{"table":{"CONTRIBUTOR":3,"MEMBER":2,"NONE":1}},"issue_authors":{"table":{"nfrerebeau":10,"soodoku":5,"jayrobwilliams":1,"benmarwick":1,"akarlinsky":1,"tsdye":1,"airesarch":1}},"pull_request_authors":{"table":{"benmarwick":2,"nfrerebeau":2,"soodoku":1,"jayrobwilliams":1}},"host":{"table":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2026-03-04T00:00:11.190Z","repositories_count":13574656,"issues_count":34979339,"pull_requests_count":114070357,"authors_count":11181643,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"}},"past_year_issue_labels_count":{"table":{}},"past_year_pull_request_labels_count":{"table":{}},"past_year_issue_author_associations_count":{"table":{}},"past_year_pull_request_author_associations_count":{"table":{}},"past_year_issue_authors":{"table":{}},"past_year_pull_request_authors":{"table":{}},"maintainers":[{"table":{"login":"nfrerebeau","count":12,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/nfrerebeau"}}],"active_maintainers":[]}},"events":{"total":{"ReleaseEvent":1,"ForkEvent":1,"WatchEvent":1,"PushEvent":18,"CreateEvent":5},"last_year":{"ForkEvent":1,"WatchEvent":1,"PushEvent":6,"CreateEvent":4}},"keywords":["archaeological-science","archaeology","data-visualization","r-package"],"dependencies":[{"ecosystem":"cran","filepath":"DESCRIPTION","sha":null,"kind":"manifest","created_at":"2022-08-25T02:50:34.091Z","updated_at":"2022-08-25T02:50:34.091Z","repository_link":"https://github.com/tesselle/tabula/blob/main/DESCRIPTION","dependencies":[{"id":2615922943,"package_name":"R","ecosystem":"cran","requirements":"\u003e= 3.3","direct":true,"kind":"depends","optional":false},{"id":2615922949,"package_name":"arkhe","ecosystem":"cran","requirements":"\u003e= 0.5.0","direct":true,"kind":"imports","optional":false},{"id":2615922951,"package_name":"boot","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":2615922953,"package_name":"kairos","ecosystem":"cran","requirements":"\u003e= 1.1.0","direct":true,"kind":"imports","optional":false},{"id":2615922955,"package_name":"ggplot2","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":2615922957,"package_name":"methods","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":2615922959,"package_name":"rlang","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":2615922961,"package_name":"stats","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":2615922963,"package_name":"utils","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":2615922965,"package_name":"covr","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":2615922967,"package_name":"folio","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":2615922969,"package_name":"khroma","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":2615922971,"package_name":"knitr","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":2615922973,"package_name":"magrittr","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":2615922975,"package_name":"rmarkdown","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":2615922977,"package_name":"testthat","ecosystem":"cran","requirements":"\u003e= 3.0.0","direct":true,"kind":"suggests","optional":false},{"id":2615922979,"package_name":"vdiffr","ecosystem":"cran","requirements":"\u003e= 1.0.0","direct":true,"kind":"suggests","optional":false}]}],"score":4.59511985013459,"created_at":"2025-04-11T10:22:35.644Z","updated_at":"2026-06-22T23:01:54.306Z","avatar_url":"https://github.com/tesselle.png","language":"R","codemeta":{"@context":"https://doi.org/10.5063/schema/codemeta-2.0","@type":"SoftwareSourceCode","identifier":"tabula","description":"An easy way to examine archaeological count data. This package provides several tests and measures of diversity: heterogeneity and evenness (Brillouin, Shannon, Simpson, etc.), richness and rarefaction (Chao1, Chao2, ACE, ICE, etc.), turnover and similarity (Brainerd-Robinson, etc.). It allows to easily visualize count data and statistical thresholds: rank vs abundance plots, heatmaps, Ford (1962) and Bertin (1977) diagrams, etc.","name":"tabula: Analysis and Visualization of Archaeological Count Data","relatedLink":["https://packages.tesselle.org/tabula/","https://tesselle.r-universe.dev/tabula","https://CRAN.R-project.org/package=tabula"],"codeRepository":"https://codeberg.org/tesselle/tabula","issueTracker":"https://codeberg.org/tesselle/tabula/issues","license":"https://spdx.org/licenses/GPL-3.0","version":"3.3.2","programmingLanguage":{"@type":"ComputerLanguage","name":"R","url":"https://r-project.org"},"runtimePlatform":"R version 4.5.1 (2025-06-13)","provider":{"@id":"https://cran.r-project.org","@type":"Organization","name":"Comprehensive R Archive Network (CRAN)","url":"https://cran.r-project.org"},"author":[{"@type":"Person","givenName":"Nicolas","familyName":"Frerebeau","email":"nicolas.frerebeau@u-bordeaux-montaigne.fr","@id":"https://orcid.org/0000-0001-5759-4944"}],"contributor":[{"@type":"Person","givenName":"Matthew","familyName":"Peeples","email":"matthew.peeples@asu.edu","@id":"https://orcid.org/0000-0003-4496-623X"},{"@type":"Person","givenName":"Ben","familyName":"Marwick","email":"bmarwick@uw.edu","@id":"https://orcid.org/0000-0001-7879-4531"},{"@type":"Person","givenName":"Jean-Baptiste","familyName":"Fourvel","email":"jean-baptiste.fourvel@univ-amu.fr","@id":"https://orcid.org/0000-0002-1061-4642"}],"funder":[{"@type":"Organization","name":"Université Bordeaux Montaigne"},{"@type":"Organization","name":"CNRS"}],"maintainer":[{"@type":"Person","givenName":"Nicolas","familyName":"Frerebeau","email":"nicolas.frerebeau@u-bordeaux-montaigne.fr","@id":"https://orcid.org/0000-0001-5759-4944"}],"softwareSuggestions":[{"@type":"SoftwareApplication","identifier":"folio","name":"folio","version":"\u003e= 1.5.0","provider":{"@id":"https://cran.r-project.org","@type":"Organization","name":"Comprehensive R Archive Network (CRAN)","url":"https://cran.r-project.org"},"sameAs":"https://CRAN.R-project.org/package=folio"},{"@type":"SoftwareApplication","identifier":"fontquiver","name":"fontquiver","provider":{"@id":"https://cran.r-project.org","@type":"Organization","name":"Comprehensive R Archive Network (CRAN)","url":"https://cran.r-project.org"},"sameAs":"https://CRAN.R-project.org/package=fontquiver"},{"@type":"SoftwareApplication","identifier":"knitr","name":"knitr","provider":{"@id":"https://cran.r-project.org","@type":"Organization","name":"Comprehensive R Archive Network (CRAN)","url":"https://cran.r-project.org"},"sameAs":"https://CRAN.R-project.org/package=knitr"},{"@type":"SoftwareApplication","identifier":"markdown","name":"markdown","provider":{"@id":"https://cran.r-project.org","@type":"Organization","name":"Comprehensive R Archive Network (CRAN)","url":"https://cran.r-project.org"},"sameAs":"https://CRAN.R-project.org/package=markdown"},{"@type":"SoftwareApplication","identifier":"rsvg","name":"rsvg","provider":{"@id":"https://cran.r-project.org","@type":"Organization","name":"Comprehensive R Archive Network (CRAN)","url":"https://cran.r-project.org"},"sameAs":"https://CRAN.R-project.org/package=rsvg"},{"@type":"SoftwareApplication","identifier":"svglite","name":"svglite","provider":{"@id":"https://cran.r-project.org","@type":"Organization","name":"Comprehensive R Archive Network (CRAN)","url":"https://cran.r-project.org"},"sameAs":"https://CRAN.R-project.org/package=svglite"},{"@type":"SoftwareApplication","identifier":"tinysnapshot","name":"tinysnapshot","provider":{"@id":"https://cran.r-project.org","@type":"Organization","name":"Comprehensive R Archive Network (CRAN)","url":"https://cran.r-project.org"},"sameAs":"https://CRAN.R-project.org/package=tinysnapshot"},{"@type":"SoftwareApplication","identifier":"tinytest","name":"tinytest","provider":{"@id":"https://cran.r-project.org","@type":"Organization","name":"Comprehensive R Archive Network (CRAN)","url":"https://cran.r-project.org"},"sameAs":"https://CRAN.R-project.org/package=tinytest"}],"softwareRequirements":{"1":{"@type":"SoftwareApplication","identifier":"R","name":"R","version":"\u003e= 3.5"},"2":{"@type":"SoftwareApplication","identifier":"arkhe","name":"arkhe","version":"\u003e= 1.11.0","provider":{"@id":"https://cran.r-project.org","@type":"Organization","name":"Comprehensive R Archive Network (CRAN)","url":"https://cran.r-project.org"},"sameAs":"https://CRAN.R-project.org/package=arkhe"},"3":{"@type":"SoftwareApplication","identifier":"graphics","name":"graphics"},"4":{"@type":"SoftwareApplication","identifier":"grDevices","name":"grDevices"},"5":{"@type":"SoftwareApplication","identifier":"khroma","name":"khroma","version":"\u003e= 1.16.0","provider":{"@id":"https://cran.r-project.org","@type":"Organization","name":"Comprehensive R Archive Network (CRAN)","url":"https://cran.r-project.org"},"sameAs":"https://CRAN.R-project.org/package=khroma"},"6":{"@type":"SoftwareApplication","identifier":"methods","name":"methods"},"7":{"@type":"SoftwareApplication","identifier":"stats","name":"stats"},"8":{"@type":"SoftwareApplication","identifier":"utils","name":"utils"},"SystemRequirements":null},"applicationCategory":"ArchaeologicalScience","isPartOf":"https://www.tesselle.org","keywords":["archaeological-science","archaeology","data-visualization","diversity-index","r-package"],"fileSize":"1663.881KB","citation":[{"@type":"ScholarlyArticle","datePublished":"2019","author":[{"@type":"Person","givenName":"Nicolas","familyName":"Frerebeau"}],"name":"{tabula: An R Package for Analysis, Seriation, and Visualization of Archaeological Count Data}","identifier":"10.21105/joss.01821","pagination":"1821","@id":"https://doi.org/10.21105/joss.01821","sameAs":"https://doi.org/10.21105/joss.01821","isPartOf":{"@type":"PublicationIssue","issueNumber":"44","datePublished":"2019","isPartOf":{"@type":["PublicationVolume","Periodical"],"volumeNumber":"4","name":"Journal of Open Source Software"}}},{"@type":"SoftwareSourceCode","datePublished":"2025","author":[{"@type":"Person","givenName":"Nicolas","familyName":"Frerebeau"}],"name":"{tabula: Analysis and Visualization of Archaeological Count Data}","identifier":"10.5281/zenodo.1489944","url":"https://packages.tesselle.org/tabula/","description":"R package version 3.3.2","@id":"https://doi.org/10.5281/zenodo.1489944","sameAs":"https://doi.org/10.5281/zenodo.1489944"}],"developmentStatus":"https://www.repostatus.org/#active"},"publiccode":null,"project_url":"https://summary.ecosyste.ms/api/v1/projects/358380","html_url":"https://summary.ecosyste.ms/projects/358380"}